RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1158727" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1158727 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27419827 27419827 PRJNA1158727_P_NODE_139863_length_249_cov_1.556818_g132401_i0 PRJNA1158727 139863 249 1.556818 3.87647682 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 72 1.91e-12   NR HEY8522856.1 2169593 g132401 i0 51.5 0.819277108433735 68 33 81.9 0 205 2 233 300 HEY8522856.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 204 72 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27735615 27735615 PRJNA1158727_P_NODE_121184_length_266_cov_1.362694_g113723_i0 PRJNA1158727 121184 266 1.362694 3.62476604 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 107 1.41e-27   NR NIU02427.1 2202732 g113723 i0 53.4 0.992481203007519 88 41 99.2 0 1 264 6 93 NIU02427.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 264 107 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
28271892 28271892 PRJNA1158727_P_NODE_158446_length_243_cov_0.876471_g150984_i0 PRJNA1158727 158446 243 0.876471 2.12982453 Nitrososphaerota archaeon 2026795 Archaea Archaea 59.3 5.57e-8   NR MDG6922547.1 2026795 g150984 i0 39.1 0.851851851851852 69 42 85.2 0 4 210 263 331 MDG6922547.1 DDE-type integrase/transposase/recombinase [Nitrososphaerota archaeon] diamond 207 59.3 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;