RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1158727" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1158727 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27451414 27451414 PRJNA1158727_P_NODE_159083_length_242_cov_1.568047_g151621_i0 PRJNA1158727 159083 242 1.568047 3.79467374 Chlorobiaceae bacterium 2067991 Bacteria Bacteria 62 1.31e-9   NR NTU68911.1 2067991 g151621 i0 53.3 3.02479338842975 60 25 70.7 1 71 241 7 66 NTU68911.1 hypothetical protein [Chlorobiaceae bacterium] diamond 732 62 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae   Chlorobiaceae bacterium
31335807 31335807 PRJNA1158727_P_NODE_95076_length_302_cov_2.882096_g87615_i0 PRJNA1158727 95076 302 2.882096 8.70392992 Chloroherpetonaceae bacterium 2969135 Bacteria Bacteria 53.5 7.84e-7   NR MFQ3609095.1 2969135 g87615 i0 68.8 0.973509933774834 32 10 31.8 0 98 3 5 36 MFQ3609095.1 heavy metal-associated domain-containing protein [Chloroherpetonaceae bacterium] diamond 294 53.5 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   Chloroherpetonaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;