contig_metadata
18 rows where bioproject = "PRJNA1158727" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6684381 | 6684381 | PRJNA1158727_P_NODE_81226_length_336_cov_1.171103_g73765_i0 | PRJNA1158727 | 81226 | 336 | 1.171103 | 3.93490608 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 206 | 8.29e-63 | NR | WP_015470630.1 | 453816 | g73765 | i0 | 91 | 114.982142857143 | 111 | 10 | 99.1 | 0 | 2 | 334 | 18 | 128 | WP_015470630.1 elongation factor Tu [Pseudobdellovibrio exovorus] | diamond | 38634 | 206 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 10508155 | 10508155 | PRJNA1158727_P_NODE_162949_length_241_cov_0.916667_g155487_i0 | PRJNA1158727 | 162949 | 241 | 0.916667 | 2.20916747 | Bdellovibrio sp. HCB-162 | 3394234 | Bacteria | Bacteria | 261 | 3.31e-65 | NTclustered | gi|2898207634|gb|CP178861.1| | 3394234 | g155487 | i0 | 86.555 | 9.40663900414938 | 238 | 30 | 98 | 2 | 5 | 241 | 1840023 | 1840259 | Bdellovibrio sp. HCB-162 chromosome, complete genome | blastn | 2267 | 261 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB-162 | ||
| 13060259 | 13060259 | PRJNA1158727_P_NODE_84491_length_327_cov_1.452756_g77030_i0 | PRJNA1158727 | 84491 | 327 | 1.452756 | 4.75051212 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 425 | 1.57e-114 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g77030 | i0 | 90.214 | 177.562691131498 | 327 | 30 | 99 | 2 | 1 | 326 | 666173 | 666498 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 58063 | 425 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 21980769 | 21980769 | PRJNA1158727_P_NODE_140898_length_249_cov_0.875000_g133436_i0 | PRJNA1158727 | 140898 | 249 | 0.875 | 2.17875 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 368 | 1.97e-97 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g133436 | i0 | 93.548 | 136.429718875502 | 248 | 15 | 99 | 1 | 3 | 249 | 3447954 | 3447707 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 33971 | 368 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 25263768 | 25263768 | PRJNA1158727_P_NODE_130720_length_255_cov_1.692308_g123259_i0 | PRJNA1158727 | 130720 | 255 | 1.692308 | 4.3153854 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 138 | 2.06e-36 | NR | MBX3021147.1 | 2053517 | g123259 | i0 | 73.8 | 0.988235294117647 | 84 | 22 | 98.8 | 0 | 1 | 252 | 66 | 149 | MBX3021147.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Bdellovibrionales bacterium] | diamond | 252 | 138 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27134766 | 27134766 | PRJNA1158727_P_NODE_139162_length_250_cov_0.870056_g131700_i0 | PRJNA1158727 | 139162 | 250 | 0.870056 | 2.17514 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 142 | 1.87e-38 | NR | MCO5142763.1 | 2599941 | g131700 | i0 | 75.9 | 0.996 | 83 | 20 | 99.6 | 0 | 249 | 1 | 187 | 269 | MCO5142763.1 flagellar hook protein FlgE [Oligoflexia bacterium] | diamond | 249 | 142 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 27672341 | 27672341 | PRJNA1158727_P_NODE_112024_length_277_cov_1.245098_g104563_i0 | PRJNA1158727 | 112024 | 277 | 1.245098 | 3.44892146 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 85.1 | 2.78e-17 | NR | PZP56002.1 | 349221 | g104563 | i0 | 56.5 | 0.747292418772563 | 69 | 30 | 74.7 | 0 | 69 | 275 | 1 | 69 | PZP56002.1 MAG: endolytic transglycosylase MltG [Micavibrio aeruginosavorus] | diamond | 207 | 85.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 27735636 | 27735636 | PRJNA1158727_P_NODE_158764_length_242_cov_1.822485_g151302_i0 | PRJNA1158727 | 158764 | 242 | 1.822485 | 4.4104137 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 119 | 1.67e-30 | NR | MBY0316991.1 | 2053517 | g151302 | i0 | 93 | 0.706611570247934 | 57 | 4 | 70.7 | 0 | 242 | 72 | 283 | 339 | MBY0316991.1 site-specific integrase [Bdellovibrionales bacterium] | diamond | 171 | 119 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27830018 | 27830018 | PRJNA1158727_P_NODE_143784_length_248_cov_0.880000_g136322_i0 | PRJNA1158727 | 143784 | 248 | 0.88 | 2.1824 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 124 | 1.7399999999999999e-31 | NR | HEY8190593.1 | 2024841 | g136322 | i0 | 80.5 | 0.931451612903226 | 77 | 15 | 93.1 | 0 | 247 | 17 | 144 | 220 | HEY8190593.1 type II and III secretion system protein family protein [Micavibrio sp.] | diamond | 231 | 124 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 27849231 | 27849231 | PRJNA1158727_P_NODE_154944_length_244_cov_0.900585_g147482_i0 | PRJNA1158727 | 154944 | 244 | 0.900585 | 2.1974274 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 52.4 | 6.66e-6 | NR | QQG35199.1 | 349221 | g147482 | i0 | 43.9 | 2.05327868852459 | 57 | 32 | 70.1 | 0 | 70 | 240 | 15 | 71 | QQG35199.1 MAG: PH domain-containing protein [Micavibrio aeruginosavorus] | diamond | 501 | 52.8 | 0.992424242424242 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 27893073 | 27893073 | PRJNA1158727_P_NODE_152445_length_245_cov_0.895349_g144983_i0 | PRJNA1158727 | 152445 | 245 | 0.895349 | 2.19360505 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 139 | 7.99e-40 | NR | HEY8278050.1 | 3034175 | g144983 | i0 | 79 | 0.991836734693878 | 81 | 17 | 99.2 | 0 | 244 | 2 | 15 | 95 | HEY8278050.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 243 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 28177122 | 28177122 | PRJNA1158727_P_NODE_159606_length_242_cov_0.911243_g152144_i0 | PRJNA1158727 | 159606 | 242 | 0.911243 | 2.20520806 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 97.4 | 2.08e-22 | NR | MBC7530104.1 | 1971216 | g152144 | i0 | 100 | 2.4297520661157 | 49 | 0 | 60.7 | 0 | 151 | 5 | 1 | 49 | MBC7530104.1 ParA family protein [Oligoflexus sp.] | diamond | 588 | 97.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 30028266 | 30028266 | PRJNA1158727_P_NODE_160231_length_242_cov_0.911243_g152769_i0 | PRJNA1158727 | 160231 | 242 | 0.911243 | 2.20520806 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 46.6 | 0.00153 | NR | MBT4792039.1 | 2026745 | g152769 | i0 | 31.3 | 1.90909090909091 | 80 | 53 | 99.2 | 2 | 240 | 1 | 57 | 134 | MBT4792039.1 hypothetical protein [Halobacteriovoraceae bacterium] | diamond | 462 | 47 | 0.991489361702128 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovoraceae bacterium | |||
| 30293526 | 30293526 | PRJNA1158727_P_NODE_156672_length_243_cov_0.905882_g149210_i0 | PRJNA1158727 | 156672 | 243 | 0.905882 | 2.20129326 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 85.9 | 2.44e-17 | NR | HMN67242.1 | 2053517 | g149210 | i0 | 57 | 3.90123456790123 | 79 | 33 | 97.5 | 1 | 239 | 3 | 397 | 474 | HMN67242.1 choice-of-anchor D domain-containing protein [Bdellovibrionales bacterium] | diamond | 948 | 85.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30703778 | 30703778 | PRJNA1158727_P_NODE_136294_length_251_cov_0.865169_g128832_i0 | PRJNA1158727 | 136294 | 251 | 0.865169 | 2.17157419 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 113 | 1.88e-28 | NR | MFN8791414.1 | 2053517 | g128832 | i0 | 65.1 | 1.9840637450199201 | 83 | 29 | 99.2 | 0 | 250 | 2 | 28 | 110 | MFN8791414.1 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Bdellovibrionales bacterium] | diamond | 498 | 113 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30956789 | 30956789 | PRJNA1158727_P_NODE_139094_length_250_cov_0.870056_g131632_i0 | PRJNA1158727 | 139094 | 250 | 0.870056 | 2.17514 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 120 | 4.7699999999999996e-32 | NR | HEY8280566.1 | 3034175 | g131632 | i0 | 70.7 | 1.896 | 82 | 24 | 98.4 | 0 | 248 | 3 | 103 | 184 | HEY8280566.1 GGDEF domain-containing protein [Bdellovibrionota bacterium] | diamond | 474 | 120 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 31208931 | 31208931 | PRJNA1158727_P_NODE_157655_length_243_cov_0.905882_g150193_i0 | PRJNA1158727 | 157655 | 243 | 0.905882 | 2.20129326 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 75.9 | 3.99e-14 | NR | MBI2234198.1 | 349221 | g150193 | i0 | 78.6 | 0.518518518518518 | 42 | 9 | 51.9 | 0 | 117 | 242 | 1 | 42 | MBI2234198.1 UDP-3-O-acyl-N-acetylglucosamine deacetylase [Micavibrio aeruginosavorus] | diamond | 126 | 75.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 32177923 | 32177923 | PRJNA1158727_P_NODE_153298_length_244_cov_1.748538_g145836_i0 | PRJNA1158727 | 153298 | 244 | 1.748538 | 4.26643272 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 160 | 1.1999999999999999e-43 | NR | NUM58224.1 | 2026715 | g145836 | i0 | 92.5 | 1.9672131147541 | 80 | 6 | 98.4 | 0 | 242 | 3 | 138 | 217 | NUM58224.1 acyl-CoA dehydrogenase [Pseudobdellovibrionaceae bacterium] | diamond | 480 | 160 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;