RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1158727", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1158727 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30356811 30356811 PRJNA1158727_P_NODE_127172_length_259_cov_1.655914_g119711_i0 PRJNA1158727 127172 259 1.655914 4.28881726 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 145 1.3599999999999999e-42   NR HXJ46613.1 2052315 g119711 i0 88 0.961389961389961 83 10 96.1 0 257 9 73 155 HXJ46613.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Candidatus Dormiibacterota bacterium] diamond 249 145 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32000180 32000180 PRJNA1158727_P_NODE_148518_length_246_cov_0.890173_g141056_i0 PRJNA1158727 148518 246 0.890173 2.18982558 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 44.3 0.0107   NR HXN01405.1 2052315 g141056 i0 31.3 0.817073170731707 67 40 81.7 1 24 224 167 227 HXN01405.1 oligosaccharide flippase family protein [Candidatus Dormiibacterota bacterium] diamond 201 44.3 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;