RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1158727", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1158727 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16882278 16882278 PRJNA1158727_P_NODE_35934_length_685_cov_1.531046_g28649_i0 PRJNA1158727 35934 685 1.531046 10.4876651 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 92.4 1.46e-18   NR TEB19254.1 2494336 g28649 i0 30.6 1.02919708029197 235 142 95.5 7 30 683 1 231 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 705 92.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
27071903 27071903 PRJNA1158727_P_NODE_48862_length_511_cov_2.621005_g41412_i0 PRJNA1158727 48862 511 2.621005 13.39333555 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 88.6 8.57e-18   NR TEB19254.1 2494336 g41412 i0 40.4 0.886497064579256 151 81 83.4 3 67 492 3 153 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 453 88.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
32095076 32095076 PRJNA1158727_P_NODE_69758_length_375_cov_2.254967_g62297_i0 PRJNA1158727 69758 375 2.254967 8.45612625 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 92.8 4.86e-20   NR TEB19254.1 2494336 g62297 i0 47.7 0.856 107 53 85.6 1 360 40 160 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 321 92.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;