RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1158727", tax_clade = "Sar" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1158727 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10509126 10509126 PRJNA1158727_P_NODE_41649_length_595_cov_1.327586_g34249_i0 PRJNA1158727 41649 595 1.327586 7.8991367 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 270 3.02e-88   NR CEO96095.1 37360 g34249 i0 61.6 0.998319327731092 198 76 99.8 0 595 2 10 207 CEO96095.1 hypothetical protein PBRA_004785 [Plasmodiophora brassicae] diamond 594 270 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
24531534 24531534 PRJNA1158727_P_NODE_46760_length_532_cov_1.779956_g39314_i0 PRJNA1158727 46760 532 1.779956 9.46936592 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 218 1.34e-69   NR CEP02737.1 37360 g39314 i0 73.2 1.56203007518797 138 37 77.8 0 3 416 12 149 CEP02737.1 hypothetical protein PBRA_002705 [Plasmodiophora brassicae] diamond 831 218 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27830007 27830007 PRJNA1158727_P_NODE_115584_length_272_cov_2.321608_g108123_i0 PRJNA1158727 115584 272 2.321608 6.31477376 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 107 5.32e-28   NR CEP02593.1 37360 g108123 i0 64 0.948529411764706 86 31 94.9 0 259 2 11 96 CEP02593.1 hypothetical protein PBRA_002561 [Plasmodiophora brassicae] diamond 258 107 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28430089 28430089 PRJNA1158727_P_NODE_73546_length_361_cov_1.069444_g66085_i0 PRJNA1158727 73546 361 1.069444 3.86069284 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 69.3 6.88e-11   NR CEO95180.1 37360 g66085 i0 38.9 1.04709141274238 126 54 95.6 6 351 7 160 273 CEO95180.1 hypothetical protein PBRA_003946 [Plasmodiophora brassicae] diamond 378 69.3 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29345676 29345676 PRJNA1158727_P_NODE_165029_length_237_cov_2.347561_g157567_i0 PRJNA1158727 165029 237 2.347561 5.56371957 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 76.6 1.3e-15   NR CEO99081.1 37360 g157567 i0 66.7 0.607594936708861 48 16 60.8 0 236 93 95 142 CEO99081.1 hypothetical protein PBRA_007195 [Plasmodiophora brassicae] diamond 144 76.6 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29503337 29503337 PRJNA1158727_P_NODE_148790_length_246_cov_0.890173_g141328_i0 PRJNA1158727 148790 246 0.890173 2.18982558 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 87 9.41e-18   NR CEO97823.1 37360 g141328 i0 55.3 1.85365853658537 76 34 92.7 0 2 229 167 242 CEO97823.1 hypothetical protein PBRA_005937 [Plasmodiophora brassicae] diamond 456 87 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30577211 30577211 PRJNA1158727_P_NODE_145773_length_247_cov_0.885057_g138311_i0 PRJNA1158727 145773 247 0.885057 2.18609079 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 104 9.47e-25   NR CEO99397.1 37360 g138311 i0 68.6 0.850202429149798 70 22 85 0 34 243 1 70 CEO99397.1 hypothetical protein PBRA_001303 [Plasmodiophora brassicae] diamond 210 104 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30754864 30754864 PRJNA1158727_P_NODE_101014_length_291_cov_1.412844_g93553_i0 PRJNA1158727 101014 291 1.412844 4.11137604 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 7.59e-28   NR CAL69925.1 37360 g93553 i0 62.5 10.8350515463918 80 30 82.5 0 240 1 26 105 CAL69925.1 hypothetical protein [Plasmodiophora brassicae] diamond 3153 112 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30893555 30893555 PRJNA1158727_P_NODE_150674_length_245_cov_1.703488_g143212_i0 PRJNA1158727 150674 245 1.703488 4.1735456 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 66.2 2.03e-10   NR AVG22657.1 37360 g143212 i0 43 1.93469387755102 79 45 96.7 0 3 239 777 855 AVG22657.1 MAPKKK9 [Plasmodiophora brassicae] diamond 474 66.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;