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contig_metadata

29 rows where bioproject = "PRJNA1158727", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 29 ✖

tax_clade 1

  • Sar · 29 ✖

bioproject 1

  • PRJNA1158727 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5407943 5407943 PRJNA1158727_P_NODE_26425_length_897_cov_4.091019_g20042_i0 PRJNA1158727 26425 897 4.091019 36.69644043 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 350 4.969999999999998e-119   NR XP_002181180.1 556484 g20042 i0 79.2 6.72909698996656 212 44 70.9 0 862 227 6 217 XP_002181180.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] diamond 6036 350 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
11782244 11782244 PRJNA1158727_P_NODE_122710_length_264_cov_1.612565_g115249_i0 PRJNA1158727 122710 264 1.612565 4.2571716 root 1 Root_unresolved Root_unresolved 135 1.92e-35   NR EJK57400.1 159749 g115249 i0 71.3 1.97727272727273 87 25 98.9 0 262 2 283 369 EJK57400.1 hypothetical protein THAOC_22555 [Thalassiosira oceanica] diamond 522 135 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
13060297 13060297 PRJNA1158727_P_NODE_85851_length_323_cov_2.428000_g78390_i0 PRJNA1158727 85851 323 2.428 7.84244 Thalassiosira oceanica 159749 SAR_Eukaryotes SAR_Eukaryotes 104 2.26e-26   NR EJK75259.1 159749 g78390 i0 64.9 2.13622291021672 74 26 68.7 0 223 2 9 82 EJK75259.1 hypothetical protein THAOC_03022 [Thalassiosira oceanica] diamond 690 104 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
14333039 14333039 PRJNA1158727_P_NODE_147032_length_247_cov_0.885057_g139570_i0 PRJNA1158727 147032 247 0.885057 2.18609079 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 130 1.45e-36   NR KAI2494754.1 210448 g139570 i0 86.1 0.874493927125506 72 10 87.4 0 31 246 1 72 KAI2494754.1 Eukaryotic elongation factor 5A hypusine [Fragilaria crotonensis] diamond 216 130 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
15065195 15065195 PRJNA1158727_P_NODE_137272_length_250_cov_1.587571_g129810_i0 PRJNA1158727 137272 250 1.587571 3.9689275 Stephanodiscus triporus 2934178 SAR_Eukaryotes SAR_Eukaryotes 130 3.0799999999999998e-34   NR KAL3793385.1 2934178 g129810 i0 79.3 1.968 82 17 98.4 0 248 3 161 242 KAL3793385.1 hypothetical protein ACHAW5_000846 [Stephanodiscus triporus] diamond 492 130 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Stephanodiscus Stephanodiscus triporus
16340021 16340021 PRJNA1158727_P_NODE_149873_length_246_cov_0.890173_g142411_i0 PRJNA1158727 149873 246 0.890173 2.18982558 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 134 2.37e-34   NR GFH54727.1 426638 g142411 i0 76.5 28.4268292682927 81 19 98.8 0 3 245 422 502 GFH54727.1 hypothetical protein CTEN210_11203 [Chaetoceros tenuissimus] diamond 6993 134 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
19432645 19432645 PRJNA1158727_P_NODE_86276_length_322_cov_2.164659_g78815_i0 PRJNA1158727 86276 322 2.164659 6.97020198 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 350 9.57e-92   NTclustered gi|657012367|gb|KF302531.1| 2850 g78815 i0 86.901 26.0186335403727 313 39 97 2 11 322 363 52 Phaeodactylum tricornutum clone C443 40S ribosomal protein mRNA, partial cds blastn 8378 350 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
23258623 23258623 PRJNA1158727_P_NODE_78359_length_344_cov_2.815498_g70898_i0 PRJNA1158727 78359 344 2.815498 9.68531312 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 184 7.11e-56   NR KAI2505670.1 210448 g70898 i0 75.4 3.97674418604651 114 28 99.4 0 344 3 6 119 KAI2505670.1 small subunit ribosomal protein [Fragilaria crotonensis] diamond 1368 185 0.994594594594595 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
26787246 26787246 PRJNA1158727_P_NODE_102161_length_289_cov_1.810185_g94700_i0 PRJNA1158727 102161 289 1.810185 5.23143465 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 55.1 2.83e-6   NR XP_002179343.1 556484 g94700 i0 47.5 0.633217993079585 61 28 59.2 2 287 117 397 457 XP_002179343.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] diamond 183 55.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
27008501 27008501 PRJNA1158727_P_NODE_126242_length_260_cov_1.647059_g118781_i0 PRJNA1158727 126242 260 1.647059 4.2823534 Fistulifera solaris 1519565 SAR_Eukaryotes SAR_Eukaryotes 64.3 6.49e-11   NR GAX21894.1 1519565 g118781 i0 46.3 0.923076923076923 80 38 90 2 26 259 12 88 GAX21894.1 hypothetical protein FisN_30Hh096 [Fistulifera solaris] diamond 240 64.3 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Fistulifera Fistulifera solaris
27344403 27344403 PRJNA1158727_P_NODE_117143_length_271_cov_0.959596_g109682_i0 PRJNA1158727 117143 271 0.959596 2.60050516 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 73.6 6.6e-14   NR CAJ1966799.1 2856 g109682 i0 44.8 4.8929889298893 87 46 94.1 1 1 255 90 176 CAJ1966799.1 unnamed protein product [Cylindrotheca closterium] diamond 1326 73.6 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
27767129 27767129 PRJNA1158727_P_NODE_157544_length_243_cov_0.905882_g150082_i0 PRJNA1158727 157544 243 0.905882 2.20129326 Fragilariopsis cylindrus CCMP11 186039 SAR_Eukaryotes SAR_Eukaryotes 51.2 1.91e-5   NR OEU20097.1 635003 g150082 i0 43.4 0.938271604938272 76 37 91.4 4 6 227 64 135 OEU20097.1 BET3 vesicular transport protein [Fragilariopsis cylindrus CCMP1102] diamond 228 51.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Fragilariopsis Fragilariopsis cylindrus
27893080 27893080 PRJNA1158727_P_NODE_163945_length_241_cov_0.916667_g156483_i0 PRJNA1158727 163945 241 0.916667 2.20916747 Trieres chinensis 1514140 SAR_Eukaryotes SAR_Eukaryotes 68.6 6.23e-12   NR Q42395.1 1514140 g156483 i0 61.1 1.44398340248963 54 20 67.2 1 163 2 8 60 Q42395.1 RecName: Full=Fucoxanthin-chlorophyll a-c binding protein, chloroplastic; Short=FCP; Flags: Precursor [Trieres chinensis] diamond 348 68.6 1 Eukaryota Sar   Bacillariophyta Mediophyceae Eupodiscales Parodontellaceae Trieres Trieres chinensis
27944188 27944188 PRJNA1158727_P_NODE_151985_length_245_cov_0.895349_g144523_i0 PRJNA1158727 151985 245 0.895349 2.19360505 Coscinodiscophyceae 33836 SAR_Eukaryotes SAR_Eukaryotes 166 1.02e-49   NR EJK46744.1 159749 g144523 i0 93.8 1.98367346938776 81 5 99.2 0 244 2 37 117 EJK46744.1 hypothetical protein THAOC_34573 [Thalassiosira oceanica] diamond 486 166 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
27987980 27987980 PRJNA1158727_P_NODE_149885_length_246_cov_0.890173_g142423_i0 PRJNA1158727 149885 246 0.890173 2.18982558 Thalassiosira pseudonana CCMP1335 296543 SAR_Eukaryotes SAR_Eukaryotes 145 1.53e-39   NR XP_002293623.1 296543 g142423 i0 90 1.95121951219512 80 8 97.6 0 2 241 339 418 XP_002293623.1 predicted protein [Thalassiosira pseudonana CCMP1335] diamond 480 145 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
28544266 28544266 PRJNA1158727_P_NODE_143727_length_248_cov_0.880000_g136265_i0 PRJNA1158727 143727 248 0.88 2.1824 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00423   NR KAL3768868.1 382360 g136265 i0 55.4 1.4758064516129 56 25 67.7 0 244 77 182 237 KAL3768868.1 hypothetical protein ACHAWO_013154 [Cyclotella atomus] diamond 366 45.8 0.991266375545852 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella atomus
28556420 28556420 PRJNA1158727_P_NODE_156967_length_243_cov_0.905882_g149505_i0 PRJNA1158727 156967 243 0.905882 2.20129326 Thalassiosira pseudonana CCMP1335 296543 SAR_Eukaryotes SAR_Eukaryotes 157 2.11e-44   NR XP_002286746.1 296543 g149505 i0 88.9 2 81 9 100 0 1 243 79 159 XP_002286746.1 hypothetical protein THAPSDRAFT_1326 [Thalassiosira pseudonana CCMP1335] diamond 486 157 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
28619587 28619587 PRJNA1158727_P_NODE_138627_length_250_cov_0.870056_g131165_i0 PRJNA1158727 138627 250 0.870056 2.17514 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 61.6 9.1e-9   NR KAL3786486.1 29204 g131165 i0 46.4 1.944 84 24 93.6 3 14 247 104 172 KAL3786486.1 hypothetical protein HJC23_010652 [Cyclotella cryptica] diamond 486 61.6 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
29345674 29345674 PRJNA1158727_P_NODE_163649_length_241_cov_0.916667_g156187_i0 PRJNA1158727 163649 241 0.916667 2.20916747 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 149 6.69e-40   NR KAK1744090.1 267567 g156187 i0 89.9 1.96680497925311 79 8 98.3 0 4 240 506 584 KAK1744090.1 hypothetical protein QTG54_005687 [Skeletonema marinoi] diamond 474 149 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
29566522 29566522 PRJNA1158727_P_NODE_128750_length_257_cov_2.293478_g121289_i0 PRJNA1158727 128750 257 2.293478 5.89423846 Fistulifera solaris 1519565 SAR_Eukaryotes SAR_Eukaryotes 101 3.1699999999999997e-25   NR GAX27651.1 1519565 g121289 i0 74.1 0.67704280155642 58 15 67.7 0 84 257 2 59 GAX27651.1 hypothetical protein FisN_13Hh257 [Fistulifera solaris] diamond 174 101 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Fistulifera Fistulifera solaris
29566537 29566537 PRJNA1158727_P_NODE_54670_length_461_cov_2.175258_g47212_i0 PRJNA1158727 54670 461 2.175258 10.02793938 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 179 2.25e-49   NR KAL3774381.1 29204 g47212 i0 56.9 4.97830802603037 153 66 99.6 0 3 461 548 700 KAL3774381.1 hypothetical protein HJC23_012157 [Cyclotella cryptica] diamond 2295 179 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
29724207 29724207 PRJNA1158727_P_NODE_146510_length_247_cov_0.885057_g139048_i0 PRJNA1158727 146510 247 0.885057 2.18609079 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 74.3 2.88e-13   NR KAL3805648.1 29204 g139048 i0 58.9 1.4331983805668 56 23 68 0 194 27 683 738 KAL3805648.1 hypothetical protein HJC23_005892 [Cyclotella cryptica] diamond 354 74.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
29850908 29850908 PRJNA1158727_P_NODE_143371_length_248_cov_0.880000_g135909_i0 PRJNA1158727 143371 248 0.88 2.1824 Stephanodiscus triporus 2934178 SAR_Eukaryotes SAR_Eukaryotes 55.8 9.56e-7   NR KAL3777805.1 2934178 g135909 i0 92.9 0.67741935483871 28 2 33.9 0 135 218 29 56 KAL3777805.1 hypothetical protein ACHAW5_001783 [Stephanodiscus triporus] diamond 168 55.8 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Stephanodiscus Stephanodiscus triporus
30514269 30514269 PRJNA1158727_P_NODE_148593_length_246_cov_0.890173_g141131_i0 PRJNA1158727 148593 246 0.890173 2.18982558 Thalassiosira pseudonana CCMP1335 296543 SAR_Eukaryotes SAR_Eukaryotes 95.1 1.41e-20   NR XP_002296405.1 296543 g141131 i0 60.8 0.902439024390244 74 21 90.2 1 24 245 250 315 XP_002296405.1 predicted protein [Thalassiosira pseudonana CCMP1335] diamond 222 95.1 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
30672172 30672172 PRJNA1158727_P_NODE_93993_length_305_cov_1.181034_g86532_i0 PRJNA1158727 93993 305 1.181034 3.6021537 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00206   NR KAG7354666.1 303405 g86532 i0 79.3 0.570491803278689 29 6 28.5 0 88 2 49 77 KAG7354666.1 hypothetical protein IV203_004022 [Nitzschia inconspicua] diamond 174 46.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
31083010 31083010 PRJNA1158727_P_NODE_143975_length_248_cov_0.880000_g136513_i0 PRJNA1158727 143975 248 0.88 2.1824 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 129 4.11e-36   NR GFH49070.1 426638 g136513 i0 84.1 0.991935483870968 82 13 99.2 0 2 247 15 96 GFH49070.1 hypothetical protein CTEN210_05546 [Chaetoceros tenuissimus] diamond 246 129 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
31652008 31652008 PRJNA1158727_P_NODE_153277_length_244_cov_1.771930_g145815_i0 PRJNA1158727 153277 244 1.77193 4.3235092 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 145 2.23e-40   NR KAL3779038.1 29204 g145815 i0 87.5 3.9344262295082 80 10 98.4 0 242 3 223 302 KAL3779038.1 hypothetical protein HJC23_011477 [Cyclotella cryptica] diamond 960 145 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
31873554 31873554 PRJNA1158727_P_NODE_136237_length_251_cov_0.865169_g128775_i0 PRJNA1158727 136237 251 0.865169 2.17157419 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 70.5 7.11e-12   NR XP_002178926.1 556484 g128775 i0 49.4 0.99203187250996006 83 35 98 3 247 2 888 964 XP_002178926.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] diamond 249 70.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
32146159 32146159 PRJNA1158727_P_NODE_59978_length_426_cov_0.951841_g52517_i0 PRJNA1158727 59978 426 0.951841 4.05484266 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 218 2.66e-64   NR GFH44192.1 426638 g52517 i0 67.4 5.95774647887324 141 46 99.3 0 423 1 379 519 GFH44192.1 hypothetical protein CTEN210_00666 [Chaetoceros tenuissimus] diamond 2538 219 0.995433789954338 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;