RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1158727", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1158727 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28556422 28556422 PRJNA1158727_P_NODE_159887_length_242_cov_0.911243_g152425_i0 PRJNA1158727 159887 242 0.911243 2.20520806 Fidelibacterota bacterium 2026760 Bacteria Bacteria 46.2 0.00217   NR MCF7741456.1 2026760 g152425 i0 50 1.27685950413223 50 22 58.3 1 69 209 252 301 MCF7741456.1 sulfate permease [Fidelibacterota bacterium] diamond 309 46.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30564898 30564898 PRJNA1158727_P_NODE_109433_length_280_cov_1.487923_g101972_i0 PRJNA1158727 109433 280 1.487923 4.1661844 Pseudomonadati 3379134 Bacteria Bacteria 112 1.54e-26   NR MBT4131763.1 2026760 g101972 i0 62 2.96785714285714 92 35 98.6 0 277 2 339 430 MBT4131763.1 hypothetical protein [Fidelibacterota bacterium] diamond 831 112 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;