RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1158727", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJNA1158727 · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11782775 11782775 PRJNA1158727_P_NODE_149210_length_246_cov_0.890173_g141748_i0 PRJNA1158727 149210 246 0.890173 2.18982558 Thecamonas trahens 529818 Root_unresolved Root_unresolved 228 3.4399999999999986e-55   NTclustered gi|923137048|ref|XM_013906535.1| 461836 g141748 i0 83.966 59.2682926829268 237 38 96 0 3 239 129 365 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_01386), mRNA blastn 14580 228 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
11785080 11785080 PRJNA1158727_P_NODE_79090_length_342_cov_1.598513_g71629_i0 PRJNA1158727 79090 342 1.598513 5.46691446 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 130 3.3000000000000003e-34   NR XP_013760592.1 461836 g71629 i0 64.4 0.885964912280702 101 36 88.6 0 338 36 239 339 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 303 130 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
13057815 13057815 PRJNA1158727_P_NODE_150931_length_245_cov_1.343023_g143469_i0 PRJNA1158727 150931 245 1.343023 3.29040635 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 77.4 8.24e-16   NR XP_013755301.1 461836 g143469 i0 51.3 0.979591836734694 80 38 98 1 2 241 18 96 XP_013755301.1 uncharacterized protein AMSG_08071 [Thecamonas trahens ATCC 50062] diamond 240 77.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;