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contig_metadata

23 rows where bioproject = "PRJNA1158727", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 23 ✖

tax_clade 1

  • Amoebozoa · 23 ✖

bioproject 1

  • PRJNA1158727 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1580172 1580172 PRJNA1158727_P_NODE_46622_length_533_cov_4.036957_g39176_i0 PRJNA1158727 46622 533 4.036957 21.51698081 Ripella sp. 805 1217113 Discosea other_Eukaryota 815 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g39176 i0 94.393 101.15947467167 535 23 100 7 1 533 14 543 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 53918 815 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
2313023 2313023 PRJNA1158727_P_NODE_63502_length_405_cov_2.237952_g56041_i0 PRJNA1158727 63502 405 2.237952 9.0637056 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 189 1.03e-59   NR XP_004339588.1 1257118 g56041 i0 89.5 1.57037037037037 105 11 77.8 0 321 7 5 109 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 636 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2857579 2857579 PRJNA1158727_P_NODE_88563_length_316_cov_4.263374_g81102_i0 PRJNA1158727 88563 316 4.263374 13.47226184 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 113 6.5e-30   NR 1PRQ_A 5755 g81102 i0 64.1 1.74683544303797 92 33 87.3 0 276 1 1 92 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 552 113 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3588239 3588239 PRJNA1158727_P_NODE_77403_length_347_cov_3.817518_g69942_i0 PRJNA1158727 77403 347 3.817518 13.24678746 Vannellidae 95227 Discosea other_Eukaryota 577 4.3799999999999985e-160   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g69942 i0 96.821 100.190201729107 346 10 99 1 2 347 1679 1335 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 34766 579 0.996545768566494 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
5408974 5408974 PRJNA1158727_P_NODE_59385_length_429_cov_1.721910_g51924_i0 PRJNA1158727 59385 429 1.72191 7.3869939 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 224 8.289999999999998e-54   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g51924 i0 80.201 65.5990675990676 298 59 69 0 1 298 418 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 28142 224 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6681669 6681669 PRJNA1158727_P_NODE_132726_length_253_cov_1.677778_g125265_i0 PRJNA1158727 132726 253 1.677778 4.24477834 Stenamoeba aeronauta 2971262 Discosea other_Eukaryota 403 5.499999999999998e-108   NTclustered gi|2283789716|gb|OP179856.1| 2971262 g125265 i0 95.331 76.2806324110672 257 7 100 5 1 253 391 136 Stenamoeba aeronauta strain Stenaero small subunit ribosomal RNA gene, partial sequence blastn 19299 403 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba aeronauta
6683225 6683225 PRJNA1158727_P_NODE_41866_length_592_cov_1.495183_g34462_i0 PRJNA1158727 41866 592 1.495183 8.85148336 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 483 1.7499999999999999e-131   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g34462 i0 81.802 89.3361486486486 577 103 97 2 17 592 1839 1264 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 52887 483 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6684722 6684722 PRJNA1158727_P_NODE_94066_length_305_cov_0.995690_g86605_i0 PRJNA1158727 94066 305 0.99569 3.0368545 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 102 2.78e-17   NTclustered gi|470459156|ref|XM_004341277.1| 1257118 g86605 i0 92.857 2.89508196721311 70 5 23 0 1 70 1097 1166 Acanthamoeba castellanii str. Neff ribosomal protein L3, putative (ACA1_264110), partial mRNA blastn 883 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9232408 9232408 PRJNA1158727_P_NODE_164788_length_238_cov_2.478788_g157326_i0 PRJNA1158727 164788 238 2.478788 5.89951544 Ripella sp. PS2 1217116 Discosea other_Eukaryota 176 1.22e-39   NTclustered gi|399764205|gb|JQ271716.1| 1217116 g157326 i0 83.59 82.0168067226891 195 25 80 7 48 238 1376 1185 Ripella sp. PS2 18S ribosomal RNA gene, partial sequence blastn 19520 176 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. PS2
11783014 11783014 PRJNA1158727_P_NODE_161430_length_241_cov_2.547619_g153968_i0 PRJNA1158727 161430 241 2.547619 6.13976179 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 134 4.09e-36   NR XP_004356622.1 1257118 g153968 i0 75.9 0.983402489626556 79 19 98.3 0 238 2 118 196 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 237 134 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15606799 15606799 PRJNA1158727_P_NODE_141853_length_249_cov_0.875000_g134391_i0 PRJNA1158727 141853 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 1.58e-26   NR XP_004333797.1 1257118 g134391 i0 82.1 0.807228915662651 67 10 78.3 2 55 249 1 67 XP_004333797.1 ADPribosylation factor, putative [Acanthamoeba castellanii str. Neff] diamond 201 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21982138 21982138 PRJNA1158727_P_NODE_39738_length_622_cov_4.289617_g32355_i0 PRJNA1158727 39738 622 4.289617 26.68141774 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 455 4.02e-123   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g32355 i0 80.56 60.2958199356913 607 105 97 9 21 622 2520 1922 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 37504 455 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27514331 27514331 PRJNA1158727_P_NODE_132683_length_253_cov_1.711111_g125222_i0 PRJNA1158727 132683 253 1.711111 4.32911083 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.1 2.71e-15   NR XP_004333651.1 1257118 g125222 i0 52.4 0.99604743083004 84 37 96 2 2 244 363 446 XP_004333651.1 coronin3, putative [Acanthamoeba castellanii str. Neff] diamond 252 80.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28177109 28177109 PRJNA1158727_P_NODE_141646_length_249_cov_0.875000_g134184_i0 PRJNA1158727 141646 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 127 1.21e-35   NR XP_004339447.1 1257118 g134184 i0 73.8 1.92771084337349 80 21 96.4 0 240 1 1 80 XP_004339447.1 ribosomal protein S26e, putative [Acanthamoeba castellanii str. Neff] diamond 480 127 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28208771 28208771 PRJNA1158727_P_NODE_163966_length_241_cov_0.916667_g156504_i0 PRJNA1158727 163966 241 0.916667 2.20916747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 88.2 3.16e-18   NR XP_004341578.1 1257118 g156504 i0 63 1.86721991701245 73 26 89.6 1 239 24 93 165 XP_004341578.1 SAM domain (Sterile alpha motif) domain containing protein [Acanthamoeba castellanii str. Neff] diamond 450 88.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28386143 28386143 PRJNA1158727_P_NODE_119486_length_268_cov_1.266667_g112025_i0 PRJNA1158727 119486 268 1.266667 3.39466756 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 127 6.3e-32   NR XP_004337378.1 1257118 g112025 i0 65.9 4.97014925373134 88 30 98.5 0 2 265 160 247 XP_004337378.1 Major Vault Protein repeatcontaining protein [Acanthamoeba castellanii str. Neff] diamond 1332 127 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28398350 28398350 PRJNA1158727_P_NODE_144726_length_248_cov_0.880000_g137264_i0 PRJNA1158727 144726 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.9 1.38e-21   NR XP_004341712.1 1257118 g137264 i0 54.3 0.979838709677419 81 36 98 1 246 4 188 267 XP_004341712.1 citrate transport family protein [Acanthamoeba castellanii str. Neff] diamond 243 95.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28966867 28966867 PRJNA1158727_P_NODE_134288_length_251_cov_1.949438_g126826_i0 PRJNA1158727 134288 251 1.949438 4.89308938 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 83.6 7.84e-17   NR XP_004349571.1 1257118 g126826 i0 56.6 1.85258964143426 76 32 89.6 1 227 3 9 84 XP_004349571.1 NAD dependent epimerase/dehydratase family protein [Acanthamoeba castellanii str. Neff] diamond 465 83.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28998621 28998621 PRJNA1158727_P_NODE_120348_length_267_cov_1.247423_g112887_i0 PRJNA1158727 120348 267 1.247423 3.33061941 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89.7 9.28e-19   NR XP_004341586.1 1257118 g112887 i0 45.1 1.8876404494382 82 45 92.1 0 253 8 308 389 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 504 89.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30040332 30040332 PRJNA1158727_P_NODE_159091_length_242_cov_1.556213_g151629_i0 PRJNA1158727 159091 242 1.556213 3.76603546 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 1.75e-37   NR AFD36232.1 5755 g151629 i0 80 5.85123966942149 80 16 99.2 0 1 240 152 231 AFD36232.1 protein kinase C3 [Acanthamoeba castellanii] diamond 1416 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30514265 30514265 PRJNA1158727_P_NODE_134573_length_251_cov_1.617978_g127111_i0 PRJNA1158727 134573 251 1.617978 4.06112478 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62 6.55e-9   NR XP_004344136.1 1257118 g127111 i0 42.5 0.872509960159363 73 42 87.3 0 249 31 397 469 XP_004344136.1 transporter, major facilitator subfamily protein [Acanthamoeba castellanii str. Neff] diamond 219 62 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31589107 31589107 PRJNA1158727_P_NODE_130556_length_255_cov_2.274725_g123095_i0 PRJNA1158727 130556 255 2.274725 5.80054875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 147 2.91e-44   NR XP_004352812.1 1257118 g123095 i0 84.5 3.95294117647059 84 13 98.8 0 253 2 1 84 XP_004352812.1 ribosomal L37ae protein family [Acanthamoeba castellanii str. Neff] diamond 1008 147 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32158521 32158521 PRJNA1158727_P_NODE_152978_length_244_cov_2.251462_g145516_i0 PRJNA1158727 152978 244 2.251462 5.49356728 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 118 8.23e-29   NR XP_004338807.1 1257118 g145516 i0 67.9 0.995901639344262 81 26 99.6 0 243 1 1365 1445 XP_004338807.1 myosin head (motor domain) domain containing protein [Acanthamoeba castellanii str. Neff] diamond 243 118 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;