RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA1156092" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1156092 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5405705 5405705 PRJNA1156092_P_NODE_12845_length_319_cov_1.837398_g12715_i0 PRJNA1156092 12845 319 1.837398 5.86129962 Heterostelium album PN5 2086695 Evosea other_Eukaryota 174 3.48e-52   NR XP_020429869.1 670386 g12715 i0 77.4 1.99373040752351 106 23 98.7 1 316 2 67 172 XP_020429869.1 subunit of heterodimeric actin capping protein cap32/34 [Heterostelium album PN500] diamond 636 174 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
9965424 9965424 PRJNA1156092_P_NODE_28688_length_245_cov_0.895349_g28558_i0 PRJNA1156092 28688 245 0.895349 2.19360505 Entamoeba 5758 Evosea other_Eukaryota 182 2.7e-41   NTclustered gi|158940|gb|L02417.1|ENHEF2 5759 g28558 i0 80.247 33.5469387755102 243 46 99 2 4 245 442 201 Entamoeba histolytica translation elongation factor-2 (EF-2) mRNA, complete cds blastn 8219 182 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
11240477 11240477 PRJNA1156092_P_NODE_17889_length_278_cov_1.287805_g17759_i0 PRJNA1156092 17889 278 1.287805 3.5800979 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.026   NTclustered gi|470239202|ref|XM_004351315.1| 261658 g17759 i0 100 0.201438848920863 28 0 10 0 141 168 120 147 Cavenderia fasciculata subunit of anaphase promoting complex (cdc26), partial mRNA blastn 56 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
26882247 26882247 PRJNA1156092_P_NODE_3941_length_512_cov_2.300683_g3812_i0 PRJNA1156092 3941 512 2.300683 11.77949696 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 53.5 9.25e-5   NR XP_004183375.1 370355 g3812 i0 37.2 0.50390625 86 44 45.7 2 106 339 394 477 XP_004183375.1 hypothetical protein EIN_347160 [Entamoeba invadens IP1] diamond 258 53.5 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
27893046 27893046 PRJNA1156092_P_NODE_27725_length_246_cov_0.890173_g27595_i0 PRJNA1156092 27725 246 0.890173 2.18982558 Entamoeba histolytica 5759 Evosea other_Eukaryota 45.4 0.00453   NR BFU23647.1 5759 g27595 i0 41.7 1.46341463414634 60 26 73.2 3 198 19 7 57 BFU23647.1 protein kinase domain containing protein [Entamoeba histolytica] diamond 360 45.4 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
28019634 28019634 PRJNA1156092_P_NODE_27565_length_246_cov_0.890173_g27435_i0 PRJNA1156092 27565 246 0.890173 2.18982558 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 91.3 3.37e-20   NR KYQ89742.1 361077 g27435 i0 52.5 0.975609756097561 80 38 97.6 0 245 6 50 129 KYQ89742.1 component of the counting factor (CF) complex [Tieghemostelium lacteum] diamond 240 91.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28903321 28903321 PRJNA1156092_P_NODE_20588_length_259_cov_1.655914_g20458_i0 PRJNA1156092 20588 259 1.655914 4.28881726 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 47.4 1.61e-4   NR KAH3761397.1 1580589 g20458 i0 49 1.13513513513514 49 24 56.8 1 254 108 33 80 KAH3761397.1 hypothetical protein Pelo_6796 [Pelomyxa schiedti] diamond 294 47.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29743592 29743592 PRJNA1156092_P_NODE_17830_length_278_cov_2.253659_g17700_i0 PRJNA1156092 17830 278 2.253659 6.26517202 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 145 5.87e-38   NR XP_003292154.1 5786 g17700 i0 77.2 6.92805755395683 92 21 99.3 0 2 277 542 633 XP_003292154.1 major vault protein-alpha [Dictyostelium purpureum] diamond 1926 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30419804 30419804 PRJNA1156092_P_NODE_31893_length_241_cov_1.541667_g31763_i0 PRJNA1156092 31893 241 1.541667 3.7154174700000002 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 110 2.57e-26   NR KAH3762165.1 1580589 g31763 i0 57.5 0.995850622406639 80 34 99.6 0 241 2 302 381 KAH3762165.1 hypothetical protein Pelo_5976 [Pelomyxa schiedti] diamond 240 110 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31746969 31746969 PRJNA1156092_P_NODE_29637_length_244_cov_0.900585_g29507_i0 PRJNA1156092 29637 244 0.900585 2.1974274 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 46.6 0.00171   NR PRP77143.1 1890364 g29507 i0 39.1 0.786885245901639 64 34 78.7 2 198 7 351 409 PRP77143.1 alpha amylase domain-containing protein, partial [Planoprotostelium fungivorum] diamond 192 46.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31873534 31873534 PRJNA1156092_P_NODE_32377_length_241_cov_0.916667_g32247_i0 PRJNA1156092 32377 241 0.916667 2.20916747 Heterostelium album PN5 2086695 Evosea other_Eukaryota 54.7 1.82e-6   NR XP_020434654.1 670386 g32247 i0 45 1.48132780082988 60 33 74.7 0 237 58 114 173 XP_020434654.1 slowmo family protein [Heterostelium album PN500] diamond 357 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
32632394 32632394 PRJNA1156092_P_NODE_29560_length_244_cov_0.900585_g29430_i0 PRJNA1156092 29560 244 0.900585 2.1974274 Dictyostelium purpureum 5786 Evosea other_Eukaryota 73.9 2.51e-13   NR XP_003287943.1 5786 g29430 i0 47.4 0.934426229508197 76 40 93.4 0 233 6 64 139 XP_003287943.1 uncharacterized protein DICPUDRAFT_33288 [Dictyostelium purpureum] diamond 228 73.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32821539 32821539 PRJNA1156092_P_NODE_27580_length_246_cov_0.890173_g27450_i0 PRJNA1156092 27580 246 0.890173 2.18982558 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 108 1.04e-25   NR PRP79959.1 1890364 g27450 i0 65.3 0.914634146341463 75 26 91.5 0 227 3 212 286 PRP79959.1 aminotransferase [Planoprotostelium fungivorum] diamond 225 108 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;