RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1156092" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28291303 28291303 PRJNA1156092_P_NODE_29046_length_244_cov_0.900585_g28916_i0 PRJNA1156092 29046 244 0.900585 2.1974274 Asteroidea 7588 Echinodermata other_Eukaryota 58.5 9.47e-8   NR XP_033646741.1 7604 g28916 i0 47.6 3.79918032786885 63 31 77.5 1 236 48 24 84 XP_033646741.1 LOW QUALITY PROTEIN: matrilin-4-like [Asterias rubens] diamond 927 58.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
31240845 31240845 PRJNA1156092_P_NODE_20695_length_259_cov_1.182796_g20565_i0 PRJNA1156092 20695 259 1.182796 3.06344164 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 80.9 1.47e-15   NR KAJ8043112.1 206669 g20565 i0 44.4 0.938223938223938 81 43 93.8 1 2 244 203 281 KAJ8043112.1 Nucleoredoxin [Holothuria leucospilota] diamond 243 80.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;