RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1156092" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1156092 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9231029 9231029 PRJNA1156092_P_NODE_7308_length_397_cov_1.391975_g7178_i0 PRJNA1156092 7308 397 1.391975 5.52614075 Synchytrium microbalum 1806994 Fungi Fungi 303 9.5e-78   NTclustered gi|1759169267|ref|XM_031172234.1| 1806994 g7178 i0 82.985 74.4508816120907 335 57 84 0 53 387 1 335 Synchytrium microbalum uncharacterized protein (SmJEL517_g06308), partial mRNA blastn 29557 303 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
27103400 27103400 PRJNA1156092_P_NODE_21362_length_254_cov_1.276243_g21232_i0 PRJNA1156092 21362 254 1.276243 3.24165722 Nowakowskiella sp. JEL 2012159 Fungi Fungi 71.2 3.98e-12   NR KAJ1570054.1 2732417 g21232 i0 43.5 1.00393700787402 85 45 98 2 254 6 828 911 KAJ1570054.1 large subunit of alpha-aminoadipate reductase [Nowakowskiella sp. JEL0078] diamond 255 71.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0078
28398311 28398311 PRJNA1156092_P_NODE_16906_length_285_cov_1.212264_g16776_i0 PRJNA1156092 16906 285 1.212264 3.4549524 Rhizophlyctis rosea 64517 Fungi Fungi 80.9 7.28e-16   NR KAJ3039957.1 64517 g16776 i0 48.5 1.02105263157895 97 45 96.8 3 2 277 62 158 KAJ3039957.1 hypothetical protein HDV00_011623 [Rhizophlyctis rosea] diamond 291 80.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
28524781 28524781 PRJNA1156092_P_NODE_1847_length_713_cov_1.415625_g1723_i0 PRJNA1156092 1847 713 1.415625 10.09340625 Gorgonomyces haynaldii 382530 Fungi Fungi 143 8.54e-39   NR KAI8905615.1 382530 g1723 i0 46.2 0.782608695652174 186 96 77 3 695 147 1 185 KAI8905615.1 ubiquitin [Gorgonomyces haynaldii] diamond 558 143 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Gorgonomycetaceae Gorgonomyces Gorgonomyces haynaldii
29660897 29660897 PRJNA1156092_P_NODE_28190_length_245_cov_0.895349_g28060_i0 PRJNA1156092 28190 245 0.895349 2.19360505 Gonapodya prolifera JEL478 1344416 Fungi Fungi 42.7 0.0365   NR KXS10500.1 1344416 g28060 i0 44.6 0.685714285714286 56 28 68.6 2 58 225 39 91 KXS10500.1 hypothetical protein M427DRAFT_103522 [Gonapodya prolifera JEL478] diamond 168 42.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya prolifera
29755856 29755856 PRJNA1156092_P_NODE_13111_length_317_cov_0.938525_g12981_i0 PRJNA1156092 13111 317 0.938525 2.97512425 Quaeritorhiza haematococci 2654861 Fungi Fungi 86.3 4.69e-17   NR KAJ3077812.1 2654861 g12981 i0 44.2 1.80757097791798 95 53 89.9 0 317 33 279 373 KAJ3077812.1 hypothetical protein HK102_004949 [Quaeritorhiza haematococci] diamond 573 86.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
32411603 32411603 PRJNA1156092_P_NODE_28579_length_245_cov_0.895349_g28449_i0 PRJNA1156092 28579 245 0.895349 2.19360505 Spizellomyces sp. 'palustris' 117820 Fungi Fungi 77 3.27e-14   NR TPX59755.1 117820 g28449 i0 53.8 0.979591836734694 80 37 98 0 5 244 554 633 TPX59755.1 hypothetical protein SpCBS45565_g07657 [Spizellomyces sp. 'palustris'] diamond 240 77 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;