RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1156092" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1156092 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16879884 16879884 PRJNA1156092_P_NODE_22954_length_250_cov_0.870056_g22824_i0 PRJNA1156092 22954 250 0.870056 2.17514 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 276 1.2299999999999999e-69   NTclustered gi|2874253811|emb|OY969795.1| 464461 g22824 i0 87.045 105.572 247 28 98 3 6 250 653586 653830 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 26393 276 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
28461731 28461731 PRJNA1156092_P_NODE_27726_length_246_cov_0.890173_g27596_i0 PRJNA1156092 27726 246 0.890173 2.18982558 Waddliaceae bacterium 2026802 Bacteria Bacteria 86.3 1.81e-17   NR MBT3394650.1 2026802 g27596 i0 48.9 1.14634146341463 94 31 93.9 2 12 242 223 316 MBT3394650.1 hypothetical protein [Waddliaceae bacterium] diamond 282 86.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae   Waddliaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;