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contig_metadata

20 rows where bioproject = "PRJNA1156092" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1156092 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11781591 11781591 PRJNA1156092_P_NODE_31650_length_242_cov_0.911243_g31520_i0 PRJNA1156092 31650 242 0.911243 2.20520806 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 60.2 1.3e-4   NTclustered gi|2874253710|emb|OY969475.1| 2283092 g31520 i0 94.737 0.301652892561983 38 2 16 0 154 191 2761285 2761322 MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 blastn 73 60.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
14331797 14331797 PRJNA1156092_P_NODE_22512_length_251_cov_0.865169_g22382_i0 PRJNA1156092 22512 251 0.865169 2.17157419 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 311 3.4e-80   NTclustered gi|76574290|gb|DQ139438.1| 171953 g22382 i0 90.456 100.330677290837 241 16 95 6 12 250 464 699 Uncultured Acidobacteria bacterium clone CAL10 23S ribosomal RNA gene, partial sequence blastn 25183 311 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
27229895 27229895 PRJNA1156092_P_NODE_30143_length_243_cov_0.905882_g30013_i0 PRJNA1156092 30143 243 0.905882 2.20129326 Acidobacteriota bacterium 1978231 Bacteria Bacteria 115 2.75e-28   NR MDH3815151.1 1978231 g30013 i0 77.5 1.97530864197531 80 18 98.8 0 2 241 32 111 MDH3815151.1 YihY family inner membrane protein [Acidobacteriota bacterium] diamond 480 115 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27767094 27767094 PRJNA1156092_P_NODE_26624_length_247_cov_0.885057_g26494_i0 PRJNA1156092 26624 247 0.885057 2.18609079 Acidobacteriota bacterium 1978231 Bacteria Bacteria 120 4.5000000000000004e-30   NR MCG6927167.1 1978231 g26494 i0 78.6 0.850202429149798 70 15 85 0 210 1 29 98 MCG6927167.1 PQQ-binding-like beta-propeller repeat protein [Acidobacteriota bacterium] diamond 210 120 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28587977 28587977 PRJNA1156092_P_NODE_28347_length_245_cov_0.895349_g28217_i0 PRJNA1156092 28347 245 0.895349 2.19360505 Acidobacteriota bacterium 1978231 Bacteria Bacteria 123 7.62e-31   NR TDI49030.1 1978231 g28217 i0 67.9 3.97959183673469 81 25 99.2 1 1 243 64 143 TDI49030.1 MAG: GWxTD domain-containing protein [Acidobacteriota bacterium] diamond 975 123 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28998603 28998603 PRJNA1156092_P_NODE_26268_length_247_cov_0.885057_g26138_i0 PRJNA1156092 26268 247 0.885057 2.18609079 Acidobacteriota bacterium 1978231 Bacteria Bacteria 167 1.11e-48   NR MDH3814055.1 1978231 g26138 i0 95.1 0.995951417004049 82 4 99.6 0 2 247 154 235 MDH3814055.1 phytase [Acidobacteriota bacterium] diamond 246 167 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29030088 29030088 PRJNA1156092_P_NODE_28368_length_245_cov_0.895349_g28238_i0 PRJNA1156092 28368 245 0.895349 2.19360505 Acidobacteriota bacterium 1978231 Bacteria Bacteria 73.2 7.48e-13   NR UCF81106.1 1978231 g28238 i0 44 1.02857142857143 84 42 96.7 1 237 1 23 106 UCF81106.1 MAG: hypothetical protein JSV08_01400 [Acidobacteriota bacterium] diamond 252 73.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29187930 29187930 PRJNA1156092_P_NODE_25889_length_247_cov_0.885057_g25759_i0 PRJNA1156092 25889 247 0.885057 2.18609079 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 84.7 6.09e-17   NR HUR99363.1 2283092 g25759 i0 51.9 2.89068825910931 79 37 96 1 239 3 103 180 HUR99363.1 FG-GAP-like repeat-containing protein [Pyrinomonadaceae bacterium] diamond 714 84.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29345639 29345639 PRJNA1156092_P_NODE_31189_length_242_cov_0.911243_g31059_i0 PRJNA1156092 31189 242 0.911243 2.20520806 Blastocatellia bacterium 2052146 Bacteria Bacteria 135 9.139999999999999e-35   NR HEX4948950.1 2052146 g31059 i0 75.9 2.91322314049587 79 19 97.9 0 6 242 1998 2076 HEX4948950.1 LamG-like jellyroll fold domain-containing protein [Blastocatellia bacterium] diamond 705 135 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29648727 29648727 PRJNA1156092_P_NODE_25010_length_248_cov_0.880000_g24880_i0 PRJNA1156092 25010 248 0.88 2.1824 delta/epsilon subdivisions 68525 Bacteria Bacteria 102 3.179999999999999e-23   NR TDI46249.1 1978231 g24880 i0 67.1 9.31451612903226 70 23 84.7 0 38 247 320 389 TDI46249.1 MAG: 4-coumarate--CoA ligase family protein [Acidobacteriota bacterium] diamond 2310 102 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29724176 29724176 PRJNA1156092_P_NODE_28510_length_245_cov_0.895349_g28380_i0 PRJNA1156092 28510 245 0.895349 2.19360505 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.1 0.0274   NR MCZ6694927.1 1978231 g28380 i0 38.1 0.771428571428571 63 39 77.1 0 227 39 158 220 MCZ6694927.1 M24 family metallopeptidase [Acidobacteriota bacterium] diamond 189 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29977084 29977084 PRJNA1156092_P_NODE_22811_length_250_cov_1.305085_g22681_i0 PRJNA1156092 22811 250 1.305085 3.2627125 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 151 1.2499999999999997e-42   NR HEU4927226.1 2910147 g22681 i0 87.8 0.984 82 10 98.4 0 248 3 157 238 HEU4927226.1 acetylxylan esterase [Vicinamibacterales bacterium] diamond 246 151 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30071784 30071784 PRJNA1156092_P_NODE_25872_length_247_cov_0.885057_g25742_i0 PRJNA1156092 25872 247 0.885057 2.18609079 Blastocatellia bacterium 2052146 Bacteria Bacteria 45.1 0.00611   NR HZS08614.1 2052146 g25742 i0 45.8 0.582995951417004 48 26 58.3 0 195 52 382 429 HZS08614.1 ABC transporter permease [Blastocatellia bacterium] diamond 144 45.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31177481 31177481 PRJNA1156092_P_NODE_27095_length_246_cov_0.890173_g26965_i0 PRJNA1156092 27095 246 0.890173 2.18982558 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.9 1.31e-9   NR MEM7249671.1 1978231 g26965 i0 40 1.03658536585366 85 44 96.3 2 3 239 482 565 MEM7249671.1 hypothetical protein [Acidobacteriota bacterium] diamond 255 63.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31291884 31291884 PRJNA1156092_P_NODE_26035_length_247_cov_0.885057_g25905_i0 PRJNA1156092 26035 247 0.885057 2.18609079 Pseudomonadati 3379134 Bacteria Bacteria 80.1 2.62e-15   NR MEM9557358.1 1978231 g25905 i0 48.7 5.73279352226721 76 39 92.3 0 237 10 10 85 MEM9557358.1 sulfatase [Acidobacteriota bacterium] diamond 1416 80.5 0.995031055900621 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31335748 31335748 PRJNA1156092_P_NODE_25576_length_248_cov_0.880000_g25446_i0 PRJNA1156092 25576 248 0.88 2.1824 Acidobacteriota bacterium 1978231 Bacteria Bacteria 118 1.17e-28   NR MDH3815530.1 1978231 g25446 i0 65.9 1.98387096774194 82 28 99.2 0 247 2 755 836 MDH3815530.1 alpha-amylase family glycosyl hydrolase [Acidobacteriota bacterium] diamond 492 118 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31430686 31430686 PRJNA1156092_P_NODE_24696_length_249_cov_0.875000_g24566_i0 PRJNA1156092 24696 249 0.875 2.17875 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 131 2.02e-35   NR HEX9724601.1 2793154 g24566 i0 77.8 4.87951807228916 81 18 97.6 0 3 245 190 270 HEX9724601.1 XdhC family protein [Vicinamibacteria bacterium] diamond 1215 131 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
32494370 32494370 PRJNA1156092_P_NODE_32319_length_241_cov_0.916667_g32189_i0 PRJNA1156092 32319 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 70.5 9.1e-13   NR MBP1642451.1 1978231 g32189 i0 64.9 1.41908713692946 57 20 71 0 239 69 121 177 MBP1642451.1 FMN-binding domain protein [Acidobacteriota bacterium] diamond 342 70.9 0.994358251057828 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32538243 32538243 PRJNA1156092_P_NODE_29119_length_244_cov_0.900585_g28989_i0 PRJNA1156092 29119 244 0.900585 2.1974274 Acidobacteriota bacterium 1978231 Bacteria Bacteria 132 8e-35   NR TDI35159.1 1978231 g28989 i0 78.5 1.9672131147541 79 17 97.1 0 244 8 249 327 TDI35159.1 MAG: cation:proton antiporter [Acidobacteriota bacterium] diamond 480 132 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32695494 32695494 PRJNA1156092_P_NODE_27740_length_246_cov_0.884393_g27610_i0 PRJNA1156092 27740 246 0.884393 2.17560678 Candidatus Polarisedimenticolia bacterium 3069555 Bacteria Bacteria 120 2.34e-29   NR HKY31798.1 3069555 g27610 i0 73.5 4.89024390243902 83 20 98.8 1 244 2 476 558 HKY31798.1 metallophosphoesterase [Candidatus Polarisedimenticolia bacterium] diamond 1203 120 1 Bacteria   Pseudomonadati Acidobacteriota Candidatus Polarisedimenticolia       Candidatus Polarisedimenticolia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;