contig_metadata
10 rows where bioproject = "PRJNA1156092", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2853891 | 2853891 | PRJNA1156092_P_NODE_29763_length_244_cov_0.900585_g29633_i0 | PRJNA1156092 | 29763 | 244 | 0.900585 | 2.1974274 | Bdellovibrio | 958 | Bacteria | Bacteria | 127 | 6.85e-34 | NR | WP_374075959.1 | 958 | g29633 | i0 | 76.5 | 0.995901639344262 | 81 | 19 | 99.6 | 0 | 1 | 243 | 28 | 108 | WP_374075959.1 MULTISPECIES: class I SAM-dependent methyltransferase [Bdellovibrio] | diamond | 243 | 127 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | |||
| 6140102 | 6140102 | PRJNA1156092_P_NODE_31205_length_242_cov_0.911243_g31075_i0 | PRJNA1156092 | 31205 | 242 | 0.911243 | 2.20520806 | Bdellovibrio | 958 | Bacteria | Bacteria | 390 | 4.0699999999999996e-104 | NTclustered | gi|2313021230|gb|CP102930.1| | 959 | g31075 | i0 | 95.851 | 80.7066115702479 | 241 | 10 | 99 | 0 | 2 | 242 | 2386398 | 2386158 | Bdellovibrio bacteriovorus strain kdesi chromosome, complete genome | blastn | 19531 | 390 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 11781496 | 11781496 | PRJNA1156092_P_NODE_26030_length_247_cov_0.885057_g25900_i0 | PRJNA1156092 | 26030 | 247 | 0.885057 | 2.18609079 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 357 | 4.22e-94 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g25900 | i0 | 92.713 | 26.0688259109312 | 247 | 18 | 100 | 0 | 1 | 247 | 96537 | 96783 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 6439 | 357 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 27924759 | 27924759 | PRJNA1156092_P_NODE_21205_length_255_cov_1.346154_g21075_i0 | PRJNA1156092 | 21205 | 255 | 1.346154 | 3.4326927 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 136 | 1.97e-36 | NR | HLT22541.1 | 2081706 | g21075 | i0 | 77.6 | 2 | 85 | 18 | 100 | 1 | 1 | 255 | 90 | 173 | HLT22541.1 chorismate-binding protein [Bacteriovoracaceae bacterium] | diamond | 510 | 136 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 29156359 | 29156359 | PRJNA1156092_P_NODE_27929_length_245_cov_0.895349_g27799_i0 | PRJNA1156092 | 27929 | 245 | 0.895349 | 2.19360505 | Bdellovibrio sp. HCB2-146 | 3394362 | Bacteria | Bacteria | 159 | 9.16e-47 | NR | WP_413939877.1 | 3394362 | g27799 | i0 | 96.3 | 0.991836734693878 | 81 | 3 | 99.2 | 0 | 244 | 2 | 153 | 233 | WP_413939877.1 isoprenyl transferase [Bdellovibrio sp. HCB2-146] | diamond | 243 | 159 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB2-146 | ||
| 29219426 | 29219426 | PRJNA1156092_P_NODE_25429_length_248_cov_0.880000_g25299_i0 | PRJNA1156092 | 25429 | 248 | 0.88 | 2.1824 | Bdellovibrio sp. HCB2-146 | 3394362 | Bacteria | Bacteria | 147 | 2.36e-42 | NR | WP_413940938.1 | 3394362 | g25299 | i0 | 90.2 | 0.991935483870968 | 82 | 8 | 99.2 | 0 | 3 | 248 | 23 | 104 | WP_413940938.1 ribonuclease III [Bdellovibrio sp. HCB2-146] | diamond | 246 | 147 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB2-146 | ||
| 30514241 | 30514241 | PRJNA1156092_P_NODE_23153_length_250_cov_0.870056_g23023_i0 | PRJNA1156092 | 23153 | 250 | 0.870056 | 2.17514 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 111 | 1.94e-26 | NR | MDH5580332.1 | 2053517 | g23023 | i0 | 68.3 | 0.984 | 82 | 26 | 98.4 | 0 | 3 | 248 | 502 | 583 | MDH5580332.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 246 | 111 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30798506 | 30798506 | PRJNA1156092_P_NODE_31134_length_242_cov_0.911243_g31004_i0 | PRJNA1156092 | 31134 | 242 | 0.911243 | 2.20520806 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 40 | 0.0421 | NR | NOT78014.1 | 2081706 | g31004 | i0 | 43.9 | 0.508264462809917 | 41 | 20 | 47.1 | 1 | 124 | 11 | 1 | 41 | NOT78014.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 123 | 40 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 31810306 | 31810306 | PRJNA1156092_P_NODE_25897_length_247_cov_0.885057_g25767_i0 | PRJNA1156092 | 25897 | 247 | 0.885057 | 2.18609079 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 86.3 | 4.22e-19 | NR | MFL5785762.1 | 2081706 | g25767 | i0 | 56.3 | 0.862348178137652 | 71 | 31 | 86.2 | 0 | 246 | 34 | 84 | 154 | MFL5785762.1 SRPBCC domain-containing protein [Bacteriovoracaceae bacterium] | diamond | 213 | 86.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 31841749 | 31841749 | PRJNA1156092_P_NODE_12057_length_327_cov_1.212598_g11927_i0 | PRJNA1156092 | 12057 | 327 | 1.212598 | 3.96519546 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 129 | 6.62e-33 | NR | MFK7839511.1 | 2053517 | g11927 | i0 | 66 | 1.91743119266055 | 106 | 36 | 97.2 | 0 | 4 | 321 | 211 | 316 | MFK7839511.1 efflux transporter outer membrane subunit [Bdellovibrionales bacterium] | diamond | 627 | 129 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;