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contig_metadata

15 rows where bioproject = "PRJNA1156092" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 15 ✖

bioproject 1

  • PRJNA1156092 · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2312587 2312587 PRJNA1156092_P_NODE_5762_length_436_cov_1.903581_g5632_i0 PRJNA1156092 5762 436 1.903581 8.29961316 Paramyxoviridae 11158 Viruses Viruses 800 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g5632 i0 99.771 68.9839449541284 436 1 100 0 1 436 2509 2074 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 30077 806 0.992555831265509 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
4865384 4865384 PRJNA1156092_P_NODE_724_length_1041_cov_1.577479_g642_i0 PRJNA1156092 724 1041 1.577479 16.42155639 Orthorubulavirus 2560195 Viruses Viruses 1901 0   NTclustered gi|146351838|gb|EF543648.1| 149595 g642 i0 99.616 75.073967339097 1041 4 100 0 1 1041 1460 420 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 78152 1917 0.991653625456442 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
6680503 6680503 PRJNA1156092_P_NODE_13606_length_312_cov_1.271967_g13476_i0 PRJNA1156092 13606 312 1.271967 3.96853704 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 412 1.1599999999999999e-110   NTclustered gi|2754804027|tpg|BK063169.1| 3032225 g13476 i0 90.764 1.00641025641026 314 22 100 6 1 312 4593 4285 TPA_asm: Periplaneta americana dicistro-like virus hypothetical protein gene, partial cds blastn 314 412 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus
8690327 8690327 PRJNA1156092_P_NODE_3647_length_529_cov_1.065789_g3518_i0 PRJNA1156092 3647 529 1.065789 5.63802381 Orthorubulavirus 2560195 Viruses Viruses 966 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g3518 i0 99.622 85.3478260869565 529 2 100 0 1 529 2197 2725 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 45149 966 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
14331706 14331706 PRJNA1156092_P_NODE_16732_length_286_cov_1.441315_g16602_i0 PRJNA1156092 16732 286 1.441315 4.1221609 Orthorubulavirus mammalis 3052558 Viruses Viruses 529 1e-145   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g16602 i0 100 83.9965034965035 286 0 100 0 1 286 7485 7200 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 24023 529 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
16339625 16339625 PRJNA1156092_P_NODE_14493_length_304_cov_1.333333_g14363_i0 PRJNA1156092 14493 304 1.333333 4.05333232 Paramyxoviridae 11158 Viruses Viruses 556 4.919999999999999e-154   NTclustered gi|2721617856|gb|PP711545.1| 251774 g14363 i0 99.671 96.9605263157895 304 1 100 0 1 304 4834 4531 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 29476 556 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
16339742 16339742 PRJNA1156092_P_NODE_27893_length_245_cov_1.313953_g27763_i0 PRJNA1156092 27893 245 1.313953 3.21918485 Orthorubulavirus 2560195 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g27763 i0 100 76.4367346938776 245 0 100 0 1 245 42 286 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 18727 453 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
17614978 17614978 PRJNA1156092_P_NODE_25754_length_247_cov_1.770115_g25624_i0 PRJNA1156092 25754 247 1.770115 4.37218405 Orthorubulavirus 2560195 Viruses Viruses 446 8.759999999999998e-121   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g25624 i0 99.59 53.336032388664 244 1 99 0 4 247 6462 6219 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 13174 446 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
20163672 20163672 PRJNA1156092_P_NODE_6096_length_427_cov_1.220339_g5966_i0 PRJNA1156092 6096 427 1.220339 5.21084753 Paramyxoviridae 11158 Viruses Viruses 767 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g5966 i0 99.063 81.0140515222482 427 4 100 0 1 427 1161 735 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 34593 767 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
20704151 20704151 PRJNA1156092_P_NODE_21697_length_251_cov_4.084270_g21567_i0 PRJNA1156092 21697 251 4.08427 10.2515177 Mitovirus sp. 2587224 Viruses Viruses 174 4.65e-39   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g21567 i0 94.643 3.7410358565737 112 6 45 0 5 116 1 112 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 939 174 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
21439168 21439168 PRJNA1156092_P_NODE_32057_length_241_cov_0.916667_g31927_i0 PRJNA1156092 32057 241 0.916667 2.20916747 Viruses 10239 Viruses Viruses 115 2.73e-21   NTclustered gi|2461860523|dbj|LC726803.1| 1046403 g31927 i0 98.485 26.1203319502075 66 0 27 1 177 241 1143 1078 Brassica yellows virus DN134266_c8_g2_i1 gene for CP readthrough protein blastn 6295 115 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Polerovirus Polerovirus TUYV
22714137 22714137 PRJNA1156092_P_NODE_2178_length_663_cov_1.452542_g2053_i0 PRJNA1156092 2178 663 1.452542 9.63035346 Paramyxoviridae 11158 Viruses Viruses 1214 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g2053 i0 99.698 69.078431372549 663 2 100 0 1 663 3384 2722 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 45799 1225 0.991020408163265 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
23255273 23255273 PRJNA1156092_P_NODE_7499_length_393_cov_1.893750_g7369_i0 PRJNA1156092 7499 393 1.89375 7.4424375 Betacoronavirus pandemicum 3418604 Viruses Viruses 108 7.91e-19   NTclustered gi|2165834316|emb|OV196022.1| 2697049 g7369 i0 93.243 19.9618320610687 74 4 19 1 1 74 592 520 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7845 108 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23989349 23989349 PRJNA1156092_P_NODE_13559_length_312_cov_2.255230_g13429_i0 PRJNA1156092 13559 312 2.25523 7.0363176 Paramyxoviridae 11158 Viruses Viruses 575 1.3999999999999999e-159   NTclustered gi|145617272|gb|EF546392.1| 149595 g13429 i0 100 97.6410256410256 311 0 99 0 1 311 1138 828 Canine parainfluenza virus strain FC fusion protein (F) gene, complete cds blastn 30464 575 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
28828045 28828045 PRJNA1156092_P_NODE_18908_length_271_cov_1.166667_g18778_i0 PRJNA1156092 18908 271 1.166667 3.16166757 Chuvivirus 2842604 Viruses Viruses 138 1.55e-36   NR WET19887.1 2842604 g18778 i0 69.7 1.97047970479705 89 27 98.5 0 268 2 292 380 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 534 138 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;