RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1156092", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1156092 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27672331 27672331 PRJNA1156092_P_NODE_29244_length_244_cov_0.900585_g29114_i0 PRJNA1156092 29244 244 0.900585 2.1974274 Catenaria anguillulae PL171 765915 Fungi Fungi 75.5 3.19e-15   NR ORZ39709.1 765915 g29114 i0 50.6 2.91393442622951 79 39 97.1 0 1 237 40 118 ORZ39709.1 ribosomal protein L14-domain-containing protein [Catenaria anguillulae PL171] diamond 711 75.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
28808487 28808487 PRJNA1156092_P_NODE_15828_length_293_cov_0.931818_g15698_i0 PRJNA1156092 15828 293 0.931818 2.73022674 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 73.2 3.59e-13   NR KNE70352.1 578462 g15698 i0 51.3 1.59726962457338 78 37 79.9 1 242 9 64 140 KNE70352.1 ribosomal protein S3 [Allomyces macrogynus ATCC 38327] diamond 468 73.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
32526132 32526132 PRJNA1156092_P_NODE_20579_length_259_cov_1.903226_g20449_i0 PRJNA1156092 20579 259 1.903226 4.92935534 Blastocladiomycota 451459 Fungi Fungi 87.4 1.02e-19   NR KAJ1510890.1 945690 g20449 i0 54.2 3.86872586872587 83 38 96.1 0 251 3 4 86 KAJ1510890.1 ribosomal protein S15 [Coelomomyces lativittatus] diamond 1002 87.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;