RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1156092", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27482731 27482731 PRJNA1156092_P_NODE_25963_length_247_cov_0.885057_g25833_i0 PRJNA1156092 25963 247 0.885057 2.18609079 Armatimonadota bacterium 2033014 Bacteria Bacteria 89 9.12e-19   NR MER3414534.1 2033014 g25833 i0 56.1 0.995951417004049 82 36 99.6 0 247 2 57 138 MER3414534.1 bifunctional phosphoglucose/phosphomannose isomerase [Armatimonadota bacterium] diamond 246 89 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27735592 27735592 PRJNA1156092_P_NODE_22364_length_251_cov_0.865169_g22234_i0 PRJNA1156092 22364 251 0.865169 2.17157419 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 75.9 8.06e-15   NR HZH98199.1 2682144 g22234 i0 44.3 3.76494023904382 79 43 93.2 1 240 7 99 177 HZH98199.1 GNAT family N-acetyltransferase [Fimbriimonadaceae bacterium] diamond 945 75.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;