RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1156092", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13056676 13056676 PRJNA1156092_P_NODE_6871_length_407_cov_1.422156_g6741_i0 PRJNA1156092 6871 407 1.422156 5.78817492 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 195 1.65e-61   NR KAF8822128.1 476202 g6741 i0 71.5 46.2235872235872 130 37 95.8 0 391 2 9 138 KAF8822128.1 ribosomal protein RPS16 [Cardiosporidium cionae] diamond 18813 195 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
29491187 29491187 PRJNA1156092_P_NODE_31270_length_242_cov_0.911243_g31140_i0 PRJNA1156092 31270 242 0.911243 2.20520806 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 110 9.75e-27   NR KAJ1609824.1 195482 g31140 i0 73 9.11157024793388 74 20 91.7 0 242 21 180 253 KAJ1609824.1 ribosomal RNA assembly protein [Cryptosporidium canis] diamond 2205 110 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium canis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;