RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1156092", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28682719 28682719 PRJNA1156092_P_NODE_22067_length_251_cov_0.865169_g21937_i0 PRJNA1156092 22067 251 0.865169 2.17157419 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.4 1.66e-5   NR MCQ9205928.1 2035772 g21937 i0 54.7 0.633466135458167 53 18 56.2 1 143 3 8 60 MCQ9205928.1 molybdopterin-dependent oxidoreductase [Candidatus Omnitrophota bacterium] diamond 159 52.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29471547 29471547 PRJNA1156092_P_NODE_24430_length_249_cov_0.875000_g24300_i0 PRJNA1156092 24430 249 0.875 2.17875 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 109 9.889999999999999e-28   NR MBF0618856.1 2035772 g24300 i0 76.5 3.27710843373494 68 16 81.9 0 209 6 1 68 MBF0618856.1 30S ribosomal protein S3 [Candidatus Omnitrophota bacterium] diamond 816 109 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;