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contig_metadata

17 rows where bioproject = "PRJNA1156092", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 17 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 17 ✖

bioproject 1

  • PRJNA1156092 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6680651 6680651 PRJNA1156092_P_NODE_23006_length_250_cov_0.870056_g22876_i0 PRJNA1156092 23006 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 157 2.7499999999999993e-42   NR MDZ7780498.1 2026742 g22876 i0 80.5 4.92 82 16 98.4 0 248 3 509 590 MDZ7780498.1 tetratricopeptide repeat protein [Gemmatimonadota bacterium] diamond 1230 158 0.993670886075949 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
16879924 16879924 PRJNA1156092_P_NODE_25614_length_248_cov_0.880000_g25484_i0 PRJNA1156092 25614 248 0.88 2.1824 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 183 7.62e-42   NTclustered gi|2893358392|emb|OZ220683.1| 2026742 g25484 i0 80.162 2.90322580645161 247 47 99 2 3 248 1007055 1007300 MAG: Gemmatimonadota bacterium isolate c4f6f2ca-7934-440c-833b-e1b430e415c5 genome assembly, chromosome: 1 blastn 720 183 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
19428869 19428869 PRJNA1156092_P_NODE_24196_length_249_cov_0.875000_g24066_i0 PRJNA1156092 24196 249 0.875 2.17875 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 124 1.41e-33   NR MCL7960903.1 2026742 g24066 i0 74.1 1.95180722891566 81 21 97.6 0 7 249 37 117 MCL7960903.1 RecX family transcriptional regulator [Gemmatimonadota bacterium] diamond 486 124 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
26755169 26755169 PRJNA1156092_P_NODE_27461_length_246_cov_0.890173_g27331_i0 PRJNA1156092 27461 246 0.890173 2.18982558 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 160 1.09e-45   NR MEJ2203189.1 2026742 g27331 i0 92.7 2 82 6 100 0 1 246 154 235 MEJ2203189.1 Gfo/Idh/MocA family oxidoreductase [Gemmatimonadota bacterium] diamond 492 160 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
28051029 28051029 PRJNA1156092_P_NODE_28685_length_245_cov_0.895349_g28555_i0 PRJNA1156092 28685 245 0.895349 2.19360505 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 62 6.06e-9   NR HEY5413443.1 2026741 g28555 i0 47.1 1.73877551020408 70 37 85.7 0 240 31 373 442 HEY5413443.1 sigma-70 family RNA polymerase sigma factor [Gemmatimonadaceae bacterium] diamond 426 62 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
28935189 28935189 PRJNA1156092_P_NODE_30428_length_243_cov_0.905882_g30298_i0 PRJNA1156092 30428 243 0.905882 2.20129326 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 144 3.35e-41   NR MBK5099078.1 2026742 g30298 i0 87.5 0.987654320987654 80 10 98.8 0 3 242 60 139 MBK5099078.1 ATP-binding cassette domain-containing protein [Gemmatimonadota bacterium] diamond 240 144 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29093142 29093142 PRJNA1156092_P_NODE_24068_length_249_cov_0.875000_g23938_i0 PRJNA1156092 24068 249 0.875 2.17875 Longimicrobiales bacterium 2910168 Bacteria Bacteria 140 1.0699999999999998e-37   NR HSM62276.1 2910168 g23938 i0 86.6 0.987951807228916 82 11 98.8 0 2 247 44 125 HSM62276.1 sugar ABC transporter substrate-binding protein [Longimicrobiales bacterium] diamond 246 140 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
29250681 29250681 PRJNA1156092_P_NODE_31769_length_242_cov_0.905325_g31639_i0 PRJNA1156092 31769 242 0.905325 2.1908865 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 98.2 3.84e-23   NR UCF41682.1 2026742 g31639 i0 80.4 0.694214876033058 56 11 69.4 0 5 172 172 227 UCF41682.1 MAG: FKBP-type peptidyl-prolyl cis-trans isomerase [Gemmatimonadota bacterium] diamond 168 98.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29660901 29660901 PRJNA1156092_P_NODE_30710_length_243_cov_0.905882_g30580_i0 PRJNA1156092 30710 243 0.905882 2.20129326 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 147 2e-39   NR MBK92525.1 2026742 g30580 i0 88.8 7.90123456790123 80 9 98.8 0 242 3 490 569 MBK92525.1 gamma-glutamyltransferase [Gemmatimonadota bacterium] diamond 1920 147 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30134770 30134770 PRJNA1156092_P_NODE_20492_length_260_cov_1.267380_g20362_i0 PRJNA1156092 20492 260 1.26738 3.295188 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 65.5 4.51e-10   NR MCE2423439.1 2026742 g20362 i0 44.4 1.92692307692308 81 44 93.5 1 17 259 39 118 MCE2423439.1 sulfotransferase domain-containing protein [Gemmatimonadota bacterium] diamond 501 65.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30577177 30577177 PRJNA1156092_P_NODE_18013_length_277_cov_1.509804_g17883_i0 PRJNA1156092 18013 277 1.509804 4.18215708 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 181 9.119999999999999e-54   NR MBL8978092.1 2026742 g17883 i0 98.9 0.996389891696751 92 1 99.6 0 276 1 246 337 MBL8978092.1 site-2 protease family protein [Gemmatimonadota bacterium] diamond 276 181 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31482095 31482095 PRJNA1156092_P_NODE_27076_length_246_cov_0.890173_g26946_i0 PRJNA1156092 27076 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 105 1.64e-24   NR NNF29063.1 2026742 g26946 i0 54.9 3.98780487804878 82 37 100 0 1 246 150 231 NNF29063.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Gemmatimonadota bacterium] diamond 981 106 0.990566037735849 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31778616 31778616 PRJNA1156092_P_NODE_22057_length_251_cov_0.865169_g21927_i0 PRJNA1156092 22057 251 0.865169 2.17157419 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 112 1.7300000000000003e-27   NR MDH3290921.1 2026742 g21927 i0 69.9 0.872509960159363 73 22 87.3 0 1 219 293 365 MDH3290921.1 hypothetical protein [Gemmatimonadota bacterium] diamond 219 112 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31905167 31905167 PRJNA1156092_P_NODE_31177_length_242_cov_0.911243_g31047_i0 PRJNA1156092 31177 242 0.911243 2.20520806 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 167 2.2e-49   NR MBK5097856.1 2026742 g31047 i0 100 0.991735537190083 80 0 99.2 0 3 242 114 193 MBK5097856.1 2-oxoglutarate oxidoreductase [Gemmatimonadota bacterium] diamond 240 167 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32379929 32379929 PRJNA1156092_P_NODE_25659_length_248_cov_0.880000_g25529_i0 PRJNA1156092 25659 248 0.88 2.1824 Gemmatimonas sp. SG8_28 1703357 Bacteria Bacteria 43.5 0.0206   NR KPK04954.1 1703357 g25529 i0 35.8 0.810483870967742 67 43 81 0 240 40 194 260 KPK04954.1 MAG: hypothetical protein AMS20_07720 [Gemmatimonas sp. SG8_28] diamond 201 43.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp. SG8_28
32569945 32569945 PRJNA1156092_P_NODE_24659_length_249_cov_0.875000_g24529_i0 PRJNA1156092 24659 249 0.875 2.17875 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 109 2.04e-26   NR MBK5098352.1 2026742 g24529 i0 86.7 0.72289156626506 60 8 72.3 0 3 182 317 376 MBK5098352.1 alanine racemase [Gemmatimonadota bacterium] diamond 180 109 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32789853 32789853 PRJNA1156092_P_NODE_32340_length_241_cov_0.916667_g32210_i0 PRJNA1156092 32340 241 0.916667 2.20916747 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 114 9.88e-28   NR RMH21679.1 2026742 g32210 i0 65 1.99170124481328 80 28 99.6 0 241 2 141 220 RMH21679.1 MAG: transglutaminase domain-containing protein [Gemmatimonadota bacterium] diamond 480 114 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;