RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1156092" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 7 ✖

bioproject 1

  • PRJNA1156092 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1577549 1577549 PRJNA1156092_P_NODE_30442_length_243_cov_0.905882_g30312_i0 PRJNA1156092 30442 243 0.905882 2.20129326 [Leptolyngbya] sp. PCC 7376 111781 Bacteria Bacteria 52.8 0.022   NTclustered gi|427353741|gb|CP003946.1| 111781 g30312 i0 96.875 0.131687242798354 32 0 13 1 84 114 1656304 1656335 Leptolyngbya sp. PCC 7376, complete genome blastn 32 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Picosynechococcus [Leptolyngbya] sp. PCC 7376
19428801 19428801 PRJNA1156092_P_NODE_19876_length_264_cov_1.612565_g19746_i0 PRJNA1156092 19876 264 1.612565 4.2571716 uncultured Chroococcidiopsis sp. 259957 Bacteria Bacteria 374 4.53e-99   NTclustered gi|225696218|gb|FJ805885.1| 259957 g19746 i0 92.135 145.238636363636 267 18 100 3 1 264 3340 3074 Uncultured Chroococcidiopsis sp. clone NA4_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 38343 374 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
29314003 29314003 PRJNA1156092_P_NODE_12809_length_320_cov_0.935223_g12679_i0 PRJNA1156092 12809 320 0.935223 2.9927136 Calothrix sp. NIES-21 1187 Bacteria Bacteria 64.7 2.23e-10   NR WP_096603477.1 1954172 g12679 i0 48.1 1.453125 77 39 72.2 1 317 87 85 160 WP_096603477.1 hypothetical protein [Calothrix sp. NIES-2100] diamond 465 64.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Calotrichaceae Calothrix Calothrix sp. NIES-2100
30388300 30388300 PRJNA1156092_P_NODE_26093_length_247_cov_0.885057_g25963_i0 PRJNA1156092 26093 247 0.885057 2.18609079 Cyanobacteria bacterium SZAS-4 2807733 Bacteria Bacteria 75.5 1.09e-13   NR MBS1955505.1 2807733 g25963 i0 58.4 1.22672064777328 101 19 97.2 2 242 3 337 435 MBS1955505.1 DNA ligase [Cyanobacteria bacterium SZAS-4] diamond 303 75.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium SZAS-4
30849545 30849545 PRJNA1156092_P_NODE_7334_length_397_cov_0.854938_g7204_i0 PRJNA1156092 7334 397 0.854938 3.39410386 Bacteria 2 Bacteria Bacteria 152 9.58e-45   NR PSN19419.1 2107701 g7204 i0 60 5.19143576826196 115 46 86.9 0 345 1 1 115 PSN19419.1 alcohol dehydrogenase, partial [filamentous cyanobacterium CCP5] diamond 2061 152 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         filamentous cyanobacterium CCP5
31651966 31651966 PRJNA1156092_P_NODE_10117_length_349_cov_1.115942_g9987_i0 PRJNA1156092 10117 349 1.115942 3.89463758 Leptolyngbya sp. SIO1D8 2607807 Bacteria Bacteria 158 2.7799999999999993e-42   NR NER84138.1 2607807 g9987 i0 65.5 0.997134670487106 116 40 99.7 0 349 2 271 386 NER84138.1 TonB-dependent receptor [Leptolyngbya sp. SIO1D8] diamond 348 158 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. SIO1D8
32000151 32000151 PRJNA1156092_P_NODE_29538_length_244_cov_0.900585_g29408_i0 PRJNA1156092 29538 244 0.900585 2.1974274 Leptothermofonsia sichuanensis 2917832 Bacteria Bacteria 49.3 1.86e-4   NR WP_223048712.1 2917832 g29408 i0 52.5 5.42213114754098 61 27 73.8 2 33 212 1741 1800 WP_223048712.1 cadherin-like domain-containing protein [Leptothermofonsia sichuanensis] diamond 1323 49.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptothermofonsia Leptothermofonsia sichuanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;