RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1156092", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5405874 5405874 PRJNA1156092_P_NODE_23045_length_250_cov_0.870056_g22915_i0 PRJNA1156092 23045 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 132 6.5e-34   NR HVN86463.1 2838779 g22915 i0 82.9 2.952 82 14 98.4 0 248 3 36 117 HVN86463.1 biotin carboxylase N-terminal domain-containing protein [Candidatus Binatia bacterium] diamond 738 132 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28619556 28619556 PRJNA1156092_P_NODE_22287_length_251_cov_0.865169_g22157_i0 PRJNA1156092 22287 251 0.865169 2.17157419 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 85.5 3.71e-17   NR HEY2385363.1 2838779 g22157 i0 75.4 1.35059760956175 57 14 68.1 0 249 79 915 971 HEY2385363.1 DUF2339 domain-containing protein [Candidatus Binatia bacterium] diamond 339 85.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;