contig_metadata
5 rows where bioproject = "PRJNA1151638" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9229872 | 9229872 | PRJNA1151638_P_NODE_1148_length_423_cov_1.388571_g1081_i0 | PRJNA1151638 | 1148 | 423 | 1.388571 | 5.87365533 | Helicobacter sp. | 218 | Bacteria | Bacteria | 95.9 | 3.26e-22 | NR | MDU7693553.1 | 218 | g1081 | i0 | 98 | 0.354609929078014 | 50 | 1 | 35.5 | 0 | 151 | 2 | 2 | 51 | MDU7693553.1 hypothetical protein [Helicobacter sp.] | diamond | 150 | 95.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 26787211 | 26787211 | PRJNA1151638_P_NODE_1001_length_447_cov_1.887701_g934_i0 | PRJNA1151638 | 1001 | 447 | 1.887701 | 8.43802347 | Helicobacter sp. | 218 | Bacteria | Bacteria | 200 | 5.35e-62 | NR | MDU7693550.1 | 218 | g934 | i0 | 96.9 | 0.651006711409396 | 97 | 3 | 65.1 | 0 | 329 | 39 | 1 | 97 | MDU7693550.1 hypothetical protein [Helicobacter sp.] | diamond | 291 | 200 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 27008467 | 27008467 | PRJNA1151638_P_NODE_1262_length_404_cov_3.586103_g1195_i0 | PRJNA1151638 | 1262 | 404 | 3.586103 | 14.48785612 | Helicobacter sp. | 218 | Bacteria | Bacteria | 122 | 3.44e-33 | NR | MDU7693551.1 | 218 | g1195 | i0 | 93.5 | 0.690594059405941 | 93 | 6 | 69.1 | 0 | 72 | 350 | 1 | 93 | MDU7693551.1 hypothetical protein [Helicobacter sp.] | diamond | 279 | 122 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 29345612 | 29345612 | PRJNA1151638_P_NODE_2229_length_326_cov_2.403162_g2162_i0 | PRJNA1151638 | 2229 | 326 | 2.403162 | 7.83430812 | Sulfurimonas sp. | 2022749 | Bacteria | Bacteria | 56.6 | 1.15e-6 | NR | MDA7817910.1 | 2022749 | g2162 | i0 | 47.2 | 0.487730061349693 | 53 | 28 | 48.8 | 0 | 324 | 166 | 278 | 330 | MDA7817910.1 DNA adenine methylase [Sulfurimonas sp.] | diamond | 159 | 56.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Sulfurimonas sp. | ||
| 32569922 | 32569922 | PRJNA1151638_P_NODE_3779_length_272_cov_2.351759_g3712_i0 | PRJNA1151638 | 3779 | 272 | 2.351759 | 6.39678448 | Helicobacter sp. | 218 | Bacteria | Bacteria | 84 | 1.79e-17 | NR | MDU7693549.1 | 218 | g3712 | i0 | 97.8 | 1.00367647058824 | 91 | 1 | 99.3 | 1 | 3 | 272 | 35 | 125 | MDU7693549.1 hypothetical protein [Helicobacter sp.] | diamond | 273 | 84 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;