RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1151638", tax_kingdom = "Pseudomonadati" and tax_phylum = "Atribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Atribacterota · 1 ✖

tax_kingdom 1

  • Pseudomonadati · 1 ✖

bioproject 1

  • PRJNA1151638 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29850873 29850873 PRJNA1151638_P_NODE_551_length_590_cov_2.816248_g485_i0 PRJNA1151638 551 590 2.816248 16.6158632 Candidatus Atribacteria bacterium 2053509 Bacteria Bacteria 63.9 5.06e-8   NR MDK2897034.1 2053509 g485 i0 30.5 1.00169491525424 197 109 95.6 8 4 567 863 1040 MDK2897034.1 polymerase subunit alpha [Candidatus Atribacteria bacterium] diamond 591 63.9 1 Bacteria   Pseudomonadati Atribacterota Atribacteria       Candidatus Atribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;