RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1151638", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Komeiliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Komeiliibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1151638 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28366606 28366606 PRJNA1151638_P_NODE_6866_length_238_cov_2.521212_g6799_i0 PRJNA1151638 6866 238 2.521212 6.00048456 Candidatus Komeilibacteria bacterium 2053566 Bacteria Bacteria 84.7 5.81e-17   NR MBT4209827.1 2053566 g6799 i0 51.9 5.48319327731092 79 34 99.6 2 238 2 510 584 MBT4209827.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Candidatus Komeilibacteria bacterium] diamond 1305 84.7 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;