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contig_metadata

15 rows where bioproject = "PRJNA1150539" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 15 ✖

bioproject 1

  • PRJNA1150539 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7954010 7954010 PRJNA1150539_S_NODE_106587_length_233_cov_2.506250_g105991_i0 PRJNA1150539 106587 233 2.50625 5.8395625 Methanococcus maripaludis 39152 Archaea Archaea 54.7 0.006   NTclustered gi|1342459100|gb|CP026606.1| 39152 g105991 i0 94.286 0.150214592274678 35 2 15 0 107 141 1423590 1423556 Methanococcus maripaludis strain DSM 2067 chromosome, complete genome blastn 35 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
7954924 7954924 PRJNA1150539_S_NODE_96227_length_247_cov_1.517241_g95631_i0 PRJNA1150539 96227 247 1.517241 3.74758527 Candidatus Nitrososphaera gargensis 497727 Archaea Archaea 52.8 0.022   NTclustered gi|408363220|gb|CP002408.1| 1237085 g95631 i0 100 0.11336032388664 28 0 11 0 136 163 887864 887837 Candidatus Nitrososphaera gargensis Ga9.2, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
11779531 11779531 PRJNA1150539_S_NODE_107950_length_230_cov_2.343949_g107354_i0 PRJNA1150539 107950 230 2.343949 5.3910827 Halorussus gelatinilyticus 2937524 Archaea Archaea 52.8 0.021   NTclustered gi|2234308622|gb|CP096658.1| 2937524 g107354 i0 100 0.121739130434783 28 0 12 0 24 51 3593268 3593295 Halorussus gelatinilyticus strain XZYJT40 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus gelatinilyticus
18153612 18153612 PRJNA1150539_S_NODE_99655_length_244_cov_0.900585_g99059_i0 PRJNA1150539 99655 244 0.900585 2.1974274 Sulfolobus sp. S-194 2512240 Archaea Archaea 54.7 0.006   NTclustered gi|1829572363|gb|CP035730.1| 2512240 g99059 i0 90.698 0.520491803278688 43 1 16 3 121 160 641030 640988 Sulfolobus sp. S-194 chromosome, complete genome blastn 127 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. S-194
19427805 19427805 PRJNA1150539_S_NODE_82356_length_263_cov_1.394737_g81760_i0 PRJNA1150539 82356 263 1.394737 3.66815831 uncultured archaeon 115547 Archaea Archaea 56.5 0.002   NTclustered gi|1148943109|gb|KY476761.1| 115547 g81760 i0 100 0.114068441064639 30 0 11 0 198 227 1839 1868 Uncultured archaeon clone rifoxyb1_full_scaffold_3219_curated genomic sequence blastn 30 56.5 1 Archaea               uncultured archaeon
27293163 27293163 PRJNA1150539_S_NODE_86363_length_258_cov_1.270270_g85767_i0 PRJNA1150539 86363 258 1.27027 3.2772966 Salinirubellus salinus 1364945 Archaea Archaea 43.5 0.0236   NR WP_260593692.1 1364945 g85767 i0 45.6 0.662790697674419 57 27 61.6 1 67 225 66 122 WP_260593692.1 poly-gamma-glutamate biosynthesis protein PgsC/CapC [Salinirubellus salinus] diamond 171 43.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus Salinirubellus salinus
27577404 27577404 PRJNA1150539_S_NODE_44784_length_320_cov_4.271255_g44188_i0 PRJNA1150539 44784 320 4.271255 13.668016 Nanobdellati archaeon 2599936 Archaea Archaea 44.7 0.00601   NR MBI4095825.1 2599936 g44188 i0 33.9 0.553125 59 39 55.3 0 7 183 71 129 MBI4095825.1 hypothetical protein [Nanobdellati archaeon] diamond 177 44.7 1 Archaea   Nanobdellati           Nanobdellati archaeon
27924748 27924748 PRJNA1150539_S_NODE_97805_length_245_cov_3.726744_g97209_i0 PRJNA1150539 97805 245 3.726744 9.1305228 Halobacterium sp. CBA1126 2668074 Archaea Archaea 42 0.0327   NR WP_157502138.1 2668074 g97209 i0 41.9 0.52653061224489806 43 24 52.7 1 165 37 77 118 WP_157502138.1 PrsW family glutamic-type intramembrane protease, partial [Halobacterium sp. CBA1126] diamond 129 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. CBA1126
27956343 27956343 PRJNA1150539_S_NODE_19825_length_383_cov_2.738710_g19229_i0 PRJNA1150539 19825 383 2.73871 10.4892593 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 223 3.94e-73   NR HZC48256.1 2169593 g19229 i0 95.8 2.92167101827676 118 3 90.9 1 6 353 5 122 HZC48256.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 1119 223 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29250653 29250653 PRJNA1150539_S_NODE_84509_length_260_cov_2.058824_g83913_i0 PRJNA1150539 84509 260 2.058824 5.3529424 Thermoplasmatota archaeon 2806419 Archaea Archaea 41.6 0.0248   NR MCU0799209.1 2806419 g83913 i0 54.1 0.426923076923077 37 15 40.4 1 75 179 35 71 MCU0799209.1 hypothetical protein [Thermoplasmatota archaeon] diamond 111 41.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30008885 30008885 PRJNA1150539_S_NODE_107591_length_231_cov_2.101266_g106995_i0 PRJNA1150539 107591 231 2.101266 4.85392446 Thermoplasmata archaeon 1906666 Archaea Archaea 43.1 0.0221   NR MCK5309894.1 1906666 g106995 i0 37.7 0.688311688311688 53 33 68.8 0 20 178 262 314 MCK5309894.1 Gfo/Idh/MocA family oxidoreductase [Thermoplasmata archaeon] diamond 159 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30293472 30293472 PRJNA1150539_S_NODE_70812_length_278_cov_3.063415_g70216_i0 PRJNA1150539 70812 278 3.063415 8.5162937 Pyrodictium abyssi 54256 Archaea Archaea 43.5 0.00758   NR WP_338249940.1 54256 g70216 i0 38 0.539568345323741 50 30 52.9 1 38 184 45 94 WP_338249940.1 hypothetical protein [Pyrodictium abyssi] diamond 150 43.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Pyrodictiaceae Pyrodictium Pyrodictium abyssi
31272613 31272613 PRJNA1150539_S_NODE_93995_length_249_cov_1.818182_g93399_i0 PRJNA1150539 93995 249 1.818182 4.52727318 Theionarchaea archaeon 2747605 Archaea Archaea 43.1 0.0245   NR MBU7045767.1 2747605 g93399 i0 30.2 0.759036144578313 63 37 75.9 1 35 223 56 111 MBU7045767.1 hypothetical protein [Theionarchaea archaeon] diamond 189 43.1 1 Archaea   Methanobacteriati Methanobacteriota Theionarchaea       Theionarchaea archaeon
31304167 31304167 PRJNA1150539_S_NODE_107195_length_231_cov_7.367089_g106599_i0 PRJNA1150539 107195 231 7.367089 17.01797559 Thermoplasmatota archaeon 2806419 Archaea Archaea 42 0.0212   NR MEE3038678.1 2806419 g106599 i0 39.3 0.727272727272727 56 32 71.4 2 55 219 26 80 MEE3038678.1 PQQ-binding-like beta-propeller repeat protein [Thermoplasmatota archaeon] diamond 168 42 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32632364 32632364 PRJNA1150539_S_NODE_74000_length_274_cov_1.497512_g73404_i0 PRJNA1150539 74000 274 1.497512 4.10318288 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 42.7 0.0441   NR MBU0635792.1 2250274 g73404 i0 44.6 0.613138686131387 56 30 61.3 1 236 69 166 220 MBU0635792.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 168 42.7 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;