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contig_metadata

21 rows where bioproject = "PRJNA1150539", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 21 ✖

tax_phylum 1

  • Myxococcota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1150539 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4128563 4128563 PRJNA1150539_S_NODE_75464_length_272_cov_1.482412_g74868_i0 PRJNA1150539 75464 272 1.482412 4.03216064 Anaeromyxobacter paludicola 2918171 Bacteria Bacteria 274 4.889999999999998e-69   NTclustered gi|2199271117|dbj|AP025592.1| 2918171 g74868 i0 87.983 200.522058823529 233 26 86 2 40 272 1384407 1384177 Anaeromyxobacter paludicola DNA, complete genome blastn 54542 274 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter paludicola
6679749 6679749 PRJNA1150539_S_NODE_99546_length_244_cov_1.263158_g98950_i0 PRJNA1150539 99546 244 1.263158 3.08210552 Pendulispora albinea 2741071 Bacteria Bacteria 224 4.4099999999999997e-54   NTclustered gi|2698035964|gb|CP089984.1| 2741071 g98950 i0 85.202 99.4426229508197 223 27 90 5 26 244 3587953 3588173 Pendulispora albinea strain MSr11954 chromosome, complete genome blastn 24264 224 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora albinea
11780237 11780237 PRJNA1150539_S_NODE_74350_length_273_cov_3.160000_g73754_i0 PRJNA1150539 74350 273 3.16 8.6268 Pendulispora rubella 2741070 Bacteria Bacteria 298 2.92e-76   NTclustered gi|2698045512|gb|CP089929.1| 2741070 g73754 i0 88.571 319.802197802198 245 28 90 0 29 273 7290015 7289771 Pendulispora rubella strain MSr11368 chromosome, complete genome blastn 87306 298 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
23989162 23989162 PRJNA1150539_S_NODE_92059_length_251_cov_1.730337_g91463_i0 PRJNA1150539 92059 251 1.730337 4.34314587 Pendulispora 3375062 Bacteria Bacteria 374 4.27e-99   NTclustered gi|2698045512|gb|CP089929.1| 2741070 g91463 i0 93.625 174.011952191235 251 15 100 1 1 251 7289236 7289485 Pendulispora rubella strain MSr11368 chromosome, complete genome blastn 43677 374 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
27324814 27324814 PRJNA1150539_S_NODE_55063_length_302_cov_3.759825_g54467_i0 PRJNA1150539 55063 302 3.759825 11.3546715 Polyangiaceae bacterium 2268199 Bacteria Bacteria 43.5 0.0335   NR HOU89494.1 2268199 g54467 i0 42.1 0.377483443708609 38 22 37.7 0 176 289 150 187 HOU89494.1 hypothetical protein [Polyangiaceae bacterium] diamond 114 43.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27388149 27388149 PRJNA1150539_S_NODE_91243_length_252_cov_1.720670_g90647_i0 PRJNA1150539 91243 252 1.72067 4.3360884 Anaeromyxobacteraceae bacterium 2510643 Bacteria Bacteria 42.7 0.0391   NR HYS80827.1 2510643 g90647 i0 42.1 0.452380952380952 38 22 45.2 0 134 247 294 331 HYS80827.1 signal peptidase I [Anaeromyxobacteraceae bacterium] diamond 114 42.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
28019609 28019609 PRJNA1150539_S_NODE_55065_length_302_cov_3.737991_g54469_i0 PRJNA1150539 55065 302 3.737991 11.28873282 Myxococcus 32 Bacteria Bacteria 43.9 0.018   NR WP_011556118.1 32 g54469 i0 50 0.834437086092715 42 21 41.7 0 37 162 128 169 WP_011556118.1 MULTISPECIES: hypothetical protein [Myxococcus] diamond 252 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus  
28366603 28366603 PRJNA1150539_S_NODE_96826_length_246_cov_2.953757_g96230_i0 PRJNA1150539 96826 246 2.953757 7.26624222 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42.4 0.049   NR MBM4280904.1 2026735 g96230 i0 36.4 1.07317073170732 88 38 93.9 6 239 9 123 203 MBM4280904.1 carotenoid biosynthesis protein [Deltaproteobacteria bacterium] diamond 264 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28556369 28556369 PRJNA1150539_S_NODE_95427_length_248_cov_0.920000_g94831_i0 PRJNA1150539 95427 248 0.92 2.2816 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.3 0.0108   NR MBW2586917.1 2026735 g94831 i0 40 3.3508064516129 65 30 73.8 3 64 246 102 161 MBW2586917.1 zinc-dependent alcohol dehydrogenase family protein [Deltaproteobacteria bacterium] diamond 831 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28871864 28871864 PRJNA1150539_S_NODE_65388_length_286_cov_2.492958_g64792_i0 PRJNA1150539 65388 286 2.492958 7.12985988 Myxococcota bacterium 2818507 Bacteria Bacteria 42 0.0451   NR MEM9492617.1 2818507 g64792 i0 48 0.524475524475524 50 22 52.4 1 64 213 75 120 MEM9492617.1 hypothetical protein [Myxococcota bacterium] diamond 150 42 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28935171 28935171 PRJNA1150539_S_NODE_52508_length_307_cov_1.235043_g51912_i0 PRJNA1150539 52508 307 1.235043 3.79158201 Polyangiaceae bacterium 2268199 Bacteria Bacteria 130 1.24e-32   NR HEU4407791.1 2268199 g51912 i0 64.4 0.986970684039088 101 36 98.7 0 5 307 220 320 HEU4407791.1 hypothetical protein [Polyangiaceae bacterium] diamond 303 130 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29439940 29439940 PRJNA1150539_S_NODE_25590_length_364_cov_9.422680_g24994_i0 PRJNA1150539 25590 364 9.42268 34.2985552 Anaeromyxobacter sp. K 447217 Bacteria Bacteria 43.9 0.0477   NR WP_012526827.1 447217 g24994 i0 36.2 0.478021978021978 58 34 47.8 1 289 116 146 200 WP_012526827.1 CheR family methyltransferase [Anaeromyxobacter sp. K] diamond 174 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter sp. K
29787424 29787424 PRJNA1150539_S_NODE_70551_length_279_cov_1.121359_g69955_i0 PRJNA1150539 70551 279 1.121359 3.12859161 Myxococcales bacterium 2026763 Bacteria Bacteria 43.1 0.0313   NR HUB07759.1 2026763 g69955 i0 28.2 0.763440860215054 71 51 76.3 0 260 48 39 109 HUB07759.1 glycosyltransferase [Myxococcales bacterium] diamond 213 43.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29945617 29945617 PRJNA1150539_S_NODE_110371_length_222_cov_4.268456_g109775_i0 PRJNA1150539 110371 222 4.268456 9.47597232 Myxococcales bacterium 68-2 2026763 Bacteria Bacteria 42 0.049   NR OJY17026.1 1895795 g109775 i0 44.2 0.581081081081081 43 22 58.1 1 42 170 215 255 OJY17026.1 MAG: hypothetical protein BGO98_12760 [Myxococcales bacterium 68-20] diamond 129 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium 68-20
30103326 30103326 PRJNA1150539_S_NODE_50732_length_310_cov_1.400844_g50136_i0 PRJNA1150539 50732 310 1.400844 4.3426164 Bradymonadia bacterium 3121696 Bacteria Bacteria 43.5 0.0357   NR MFN3202473.1 3121696 g50136 i0 44.6 0.541935483870968 56 29 54.2 1 178 11 52 105 MFN3202473.1 hypothetical protein [Bradymonadia bacterium] diamond 168 43.5 1 Bacteria   Pseudomonadati Myxococcota Bradymonadia       Bradymonadia bacterium
30103333 30103333 PRJNA1150539_S_NODE_85332_length_259_cov_2.026882_g84736_i0 PRJNA1150539 85332 259 2.026882 5.24962438 Polyangiaceae bacterium 2268199 Bacteria Bacteria 43.1 0.0349   NR HVY30603.1 2268199 g84736 i0 31.2 0.891891891891892 77 52 89.2 1 238 8 1234 1309 HVY30603.1 toxin TcdB middle/N-terminal domain-containing protein [Polyangiaceae bacterium] diamond 231 43.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31177464 31177464 PRJNA1150539_S_NODE_99975_length_243_cov_3.705882_g99379_i0 PRJNA1150539 99975 243 3.705882 9.00529326 Myxococcota bacterium 2818507 Bacteria Bacteria 46.6 0.00155   NR HET6343425.1 2818507 g99379 i0 47.9 0.592592592592593 48 25 59.3 0 43 186 131 178 HET6343425.1 hypothetical protein [Myxococcota bacterium] diamond 144 46.6 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31399267 31399267 PRJNA1150539_S_NODE_83996_length_261_cov_1.228723_g83400_i0 PRJNA1150539 83996 261 1.228723 3.20696703 Labilithrix luteola 1391654 Bacteria Bacteria 139 7.709999999999999e-37   NR WP_205634004.1 1391654 g83400 i0 81 0.96551724137931 84 16 96.6 0 3 254 355 438 WP_205634004.1 carbohydrate porin [Labilithrix luteola] diamond 252 139 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
31430669 31430669 PRJNA1150539_S_NODE_83796_length_261_cov_1.638298_g83200_i0 PRJNA1150539 83796 261 1.638298 4.27595778 Cystobacterineae bacterium 1934914 Bacteria Bacteria 43.5 0.0159   NR MCL2178075.1 1934914 g83200 i0 35.4 0.551724137931034 48 31 55.2 0 27 170 123 170 MCL2178075.1 hypothetical protein [Cystobacterineae bacterium] diamond 144 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Cystobacterineae bacterium
31968387 31968387 PRJNA1150539_S_NODE_54418_length_303_cov_4.382609_g53822_i0 PRJNA1150539 54418 303 4.382609 13.27930527 Myxococcaceae bacterium 2484252 Bacteria Bacteria 43.9 0.0288   NR MFT3840204.1 2484252 g53822 i0 45.9 0.366336633663366 37 16 36.6 1 262 152 120 152 MFT3840204.1 hypothetical protein [Myxococcaceae bacterium] diamond 111 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
32569918 32569918 PRJNA1150539_S_NODE_81259_length_264_cov_2.607330_g80663_i0 PRJNA1150539 81259 264 2.60733 6.8833512 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42 0.0318   NR MBK7760907.1 2026735 g80663 i0 40 0.625 55 27 55.7 1 182 36 36 90 MBK7760907.1 cytochrome c [Deltaproteobacteria bacterium] diamond 165 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;