RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1150539", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1150539 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7414760 7414760 PRJNA1150539_S_NODE_9446_length_446_cov_2.922252_g8851_i0 PRJNA1150539 9446 446 2.922252 13.03324392 Viruses 10239 Viruses Viruses 58.4 0.001   NTclustered gi|2686256125|emb|OZ008436.1| 2587225 g8851 i0 97.059 6.42825112107623 34 1 8 0 1 34 1105 1072 Apocryptovirus menelaus Segment 2, partial CDS blastn 2867 58.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
12515371 12515371 PRJNA1150539_S_NODE_2790_length_736_cov_5.126697_g2175_i1 PRJNA1150539 2790 736 5.126697 37.73248992 Viruses 10239 Viruses Viruses 69.4 7.32e-7   NTclustered gi|2686256125|emb|OZ008436.1| 2587225 g2175 i1 100 5.37092391304348 37 0 5 0 700 736 76 40 Apocryptovirus menelaus Segment 2, partial CDS blastn 3953 69.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;