contig_metadata
6 rows where bioproject = "PRJNA1150539" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27388143 | 27388143 | PRJNA1150539_S_NODE_73803_length_274_cov_2.159204_g73207_i0 | PRJNA1150539 | 73803 | 274 | 2.159204 | 5.91621896 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 151 | 1.2799999999999996e-40 | NR | HEX8275021.1 | 3047548 | g73207 | i0 | 78.9 | 1.98175182481752 | 90 | 19 | 98.5 | 0 | 273 | 4 | 19 | 108 | HEX8275021.1 UbiD family decarboxylase [Longimicrobiaceae bacterium] | diamond | 543 | 151 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 27767083 | 27767083 | PRJNA1150539_S_NODE_93384_length_250_cov_0.915254_g92788_i0 | PRJNA1150539 | 93384 | 250 | 0.915254 | 2.288135 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 42.7 | 0.0398 | NR | HUP18695.1 | 2026742 | g92788 | i0 | 41.8 | 0.948 | 79 | 36 | 93.6 | 4 | 4 | 237 | 306 | 375 | HUP18695.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 237 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30988276 | 30988276 | PRJNA1150539_S_NODE_79054_length_267_cov_1.984536_g78458_i0 | PRJNA1150539 | 79054 | 267 | 1.984536 | 5.29871112 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 73.6 | 6.84e-13 | NR | MFC1614226.1 | 2026742 | g78458 | i0 | 52.1 | 2.84269662921348 | 73 | 35 | 82 | 0 | 256 | 38 | 163 | 235 | MFC1614226.1 RNA polymerase factor sigma-54 [Gemmatimonadota bacterium] | diamond | 759 | 73.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31177449 | 31177449 | PRJNA1150539_S_NODE_54755_length_303_cov_1.673913_g54159_i0 | PRJNA1150539 | 54755 | 303 | 1.673913 | 5.07195639 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 42 | 0.0471 | NR | MDP9279493.1 | 2026742 | g54159 | i0 | 51.5 | 0.326732673267327 | 33 | 16 | 32.7 | 0 | 298 | 200 | 42 | 74 | MDP9279493.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 99 | 42 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32190021 | 32190021 | PRJNA1150539_S_NODE_59218_length_295_cov_5.689189_g58622_i0 | PRJNA1150539 | 59218 | 295 | 5.689189 | 16.78310755 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 43.9 | 0.0251 | NR | MBM3957035.1 | 2026742 | g58622 | i0 | 33.3 | 0.793220338983051 | 78 | 41 | 68.1 | 2 | 248 | 48 | 259 | 336 | MBM3957035.1 ABC transporter permease [Gemmatimonadota bacterium] | diamond | 234 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32620401 | 32620401 | PRJNA1150539_S_NODE_87780_length_256_cov_2.103825_g87184_i0 | PRJNA1150539 | 87780 | 256 | 2.103825 | 5.385792 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 43.1 | 0.0313 | NR | HXY31463.1 | 2026741 | g87184 | i0 | 43.1 | 1.3359375 | 51 | 25 | 59.8 | 1 | 229 | 77 | 158 | 204 | HXY31463.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 342 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;