contig_metadata
45 rows where bioproject = "PRJNA1150539", tax_phylum = "Campylobacterota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2311938 | 2311938 | PRJNA1150539_S_NODE_27802_length_358_cov_3.361404_g27206_i0 | PRJNA1150539 | 27802 | 358 | 3.361404 | 12.03382632 | Campylobacter | 194 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|1207769205|gb|MF351718.1| | 199 | g27206 | i0 | 100 | 235.117318435754 | 358 | 0 | 100 | 0 | 1 | 358 | 836 | 479 | Campylobacter concisus strain H11O-S1 23S ribosomal RNA gene, partial sequence | blastn | 84172 | 662 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 4128760 | 4128760 | PRJNA1150539_S_NODE_95764_length_247_cov_3.287356_g95168_i0 | PRJNA1150539 | 95764 | 247 | 3.287356 | 8.11976932 | Malaciobacter marinus | 505249 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1474785413|gb|CP032101.1| | 505249 | g95168 | i0 | 100 | 0.11336032388664 | 28 | 0 | 11 | 0 | 113 | 140 | 1771291 | 1771318 | Malaciobacter marinus strain JCM 15502 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter marinus | ||
| 4864914 | 4864914 | PRJNA1150539_S_NODE_71584_length_277_cov_2.911765_g70988_i0 | PRJNA1150539 | 71584 | 277 | 2.911765 | 8.06558905 | Helicobacter | 209 | Bacteria | Bacteria | 507 | 4.53e-139 | NTclustered | gi|50957138|gb|AY596223.1| | 35818 | g70988 | i0 | 99.639 | 131.996389891697 | 277 | 1 | 100 | 0 | 1 | 277 | 952 | 676 | Helicobacter pullorum strain NCTC 12827 23S ribosomal RNA gene, partial sequence | blastn | 36563 | 512 | 0.990234375 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pullorum | ||
| 7414543 | 7414543 | PRJNA1150539_S_NODE_33166_length_345_cov_1.705882_g32570_i0 | PRJNA1150539 | 33166 | 345 | 1.705882 | 5.8852929 | root | 1 | Root_unresolved | Root_unresolved | 63.9 | 1.51e-5 | NTclustered | gi|2222034613|gb|CP094108.1| | 210 | g32570 | i0 | 97.368 | 0.614492753623188 | 38 | 0 | 11 | 1 | 298 | 334 | 685185 | 685148 | Helicobacter pylori strain Hpfe073 chromosome, complete genome | blastn | 212 | 63.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 11779534 | 11779534 | PRJNA1150539_S_NODE_108550_length_228_cov_5.303226_g107954_i0 | PRJNA1150539 | 108550 | 228 | 5.303226 | 12.09135528 | Helicobacter pylori | 210 | Bacteria | Bacteria | 93.5 | 1.2e-14 | NTclustered | gi|2222028449|gb|CP094103.1| | 210 | g107954 | i0 | 89.333 | 27.9429824561403 | 75 | 6 | 33 | 2 | 1 | 75 | 1292656 | 1292584 | Helicobacter pylori strain Hpfe077 chromosome, complete genome | blastn | 6371 | 93.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 12515391 | 12515391 | PRJNA1150539_S_NODE_31790_length_348_cov_3.225455_g31194_i0 | PRJNA1150539 | 31790 | 348 | 3.225455 | 11.2245834 | Arcobacter | 28196 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|2907625740|emb|OZ223300.1| | 165434 | g31194 | i0 | 92.308 | 0.304597701149425 | 39 | 3 | 11 | 0 | 177 | 215 | 1254902 | 1254864 | MAG: uncultured Arcobacter sp. isolate 7fb66f34-7b41-4cab-a2d2-b84adad47d9e genome assembly, chromosome: 1 | blastn | 106 | 56.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | uncultured Arcobacter sp. | ||
| 20163280 | 20163280 | PRJNA1150539_S_NODE_95556_length_248_cov_0.880000_g94960_i0 | PRJNA1150539 | 95556 | 248 | 0.88 | 2.1824 | Aliarcobacter | 2321111 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1231709647|emb|LT906455.1| | 28197 | g94960 | i0 | 100 | 0.903225806451613 | 28 | 0 | 11 | 0 | 25 | 52 | 846966 | 846993 | Arcobacter butzleri strain NCTC12481 genome assembly, chromosome: 1 | blastn | 224 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter butzleri | ||
| 21978170 | 21978170 | PRJNA1150539_S_NODE_49958_length_311_cov_2.626050_g49362_i0 | PRJNA1150539 | 49958 | 311 | 2.62605 | 8.1670155 | Helicobacter pylori | 210 | Bacteria | Bacteria | 89.8 | 2.22e-13 | NTclustered | gi|2222034613|gb|CP094108.1| | 210 | g49362 | i0 | 90 | 0.22508038585209 | 70 | 5 | 23 | 2 | 1 | 70 | 685115 | 685182 | Helicobacter pylori strain Hpfe073 chromosome, complete genome | blastn | 70 | 89.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 23988798 | 23988798 | PRJNA1150539_S_NODE_10499_length_434_cov_5.991690_g9904_i0 | PRJNA1150539 | 10499 | 434 | 5.99169 | 26.0039346 | root | 1 | Root_unresolved | Root_unresolved | 65.8 | 5.38e-6 | NTclustered | gi|2222034613|gb|CP094108.1| | 210 | g9904 | i0 | 88.889 | 8.6889400921659 | 54 | 5 | 12 | 1 | 1 | 54 | 685144 | 685196 | Helicobacter pylori strain Hpfe073 chromosome, complete genome | blastn | 3771 | 65.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 25263166 | 25263166 | PRJNA1150539_S_NODE_82360_length_263_cov_1.363158_g81764_i0 | PRJNA1150539 | 82360 | 263 | 1.363158 | 3.58510554 | Helicobacter | 209 | Bacteria | Bacteria | 475 | 1.2e-129 | NTclustered | gi|50957158|gb|AY596243.1| | 32025 | g81764 | i0 | 99.24 | 137.311787072243 | 263 | 2 | 100 | 0 | 1 | 263 | 946 | 1208 | Helicobacter hepaticus strain MIT Hh-2 23S ribosomal RNA gene, partial sequence | blastn | 36113 | 475 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter hepaticus | ||
| 26596817 | 26596817 | PRJNA1150539_S_NODE_94021_length_249_cov_1.750000_g93425_i0 | PRJNA1150539 | 94021 | 249 | 1.75 | 4.3575 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40 | 0.0336 | NR | GAA9046745.1 | 210 | g93425 | i0 | 45.5 | 0.397590361445783 | 33 | 18 | 39.8 | 0 | 143 | 241 | 9 | 41 | GAA9046745.1 hypothetical protein Kyoto184A_03240 [Helicobacter pylori] | diamond | 99 | 40 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26787198 | 26787198 | PRJNA1150539_S_NODE_34601_length_341_cov_5.723881_g34005_i0 | PRJNA1150539 | 34601 | 341 | 5.723881 | 19.51843421 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.4 | 1.16e-4 | NR | GAA8701437.1 | 210 | g34005 | i0 | 63.3 | 0.263929618768328 | 30 | 11 | 26.4 | 0 | 18 | 107 | 15 | 44 | GAA8701437.1 hypothetical protein Kyoto145A_3300 [Helicobacter pylori] | diamond | 90 | 47.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26976940 | 26976940 | PRJNA1150539_S_NODE_108162_length_229_cov_3.724359_g107566_i0 | PRJNA1150539 | 108162 | 229 | 3.724359 | 8.52878211 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 52.4 | 6.56e-7 | NR | WP_240373355.1 | 197 | g107566 | i0 | 87 | 0.301310043668122 | 23 | 3 | 30.1 | 0 | 70 | 2 | 43 | 65 | WP_240373355.1 hypothetical protein, partial [Campylobacter jejuni] | diamond | 69 | 52.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 27185926 | 27185926 | PRJNA1150539_S_NODE_63442_length_289_cov_2.472222_g62846_i0 | PRJNA1150539 | 63442 | 289 | 2.472222 | 7.14472158 | root | 1 | Root_unresolved | Root_unresolved | 54.3 | 1.26e-6 | NR | GAA9396157.1 | 210 | g62846 | i0 | 64.5 | 5.14878892733564 | 31 | 11 | 32.2 | 0 | 10 | 102 | 90 | 120 | GAA9396157.1 hypothetical protein BTM418_15410 [Helicobacter pylori] | diamond | 1488 | 54.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27356530 | 27356530 | PRJNA1150539_S_NODE_92923_length_250_cov_2.101695_g92327_i0 | PRJNA1150539 | 92923 | 250 | 2.101695 | 5.2542375 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42.7 | 0.00444 | NR | GAA6873552.1 | 210 | g92327 | i0 | 59.5 | 0.444 | 37 | 15 | 44.4 | 0 | 2 | 112 | 13 | 49 | GAA6873552.1 hypothetical protein Kyoto206A_4030 [Helicobacter pylori] | diamond | 111 | 42.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27640723 | 27640723 | PRJNA1150539_S_NODE_41684_length_326_cov_4.407115_g41088_i0 | PRJNA1150539 | 41684 | 326 | 4.407115 | 14.3671949 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42 | 0.029 | NR | GAA6971289.1 | 210 | g41088 | i0 | 48.9 | 0.414110429447853 | 45 | 18 | 36.8 | 1 | 138 | 19 | 25 | 69 | GAA6971289.1 hypothetical protein Kyoto211A_3020 [Helicobacter pylori] | diamond | 135 | 42 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28145940 | 28145940 | PRJNA1150539_S_NODE_74425_length_273_cov_2.695000_g73829_i0 | PRJNA1150539 | 74425 | 273 | 2.695 | 7.35735 | Helicobacter pylori | 210 | Bacteria | Bacteria | 67.4 | 1.58e-11 | NR | GAA8949042.1 | 210 | g73829 | i0 | 53.4 | 4.26373626373626 | 58 | 24 | 60.4 | 1 | 272 | 108 | 61 | 118 | GAA8949042.1 hypothetical protein Kyoto181A_0860 [Helicobacter pylori] | diamond | 1164 | 67.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28493132 | 28493132 | PRJNA1150539_S_NODE_32147_length_347_cov_3.806569_g31551_i0 | PRJNA1150539 | 32147 | 347 | 3.806569 | 13.20879443 | Helicobacter pylori | 210 | Bacteria | Bacteria | 45.4 | 8.11e-4 | NR | GAA8966937.1 | 210 | g31551 | i0 | 66.7 | 0.259365994236311 | 30 | 10 | 25.9 | 0 | 169 | 80 | 4 | 33 | GAA8966937.1 hypothetical protein Kyoto181A_4130 [Helicobacter pylori] | diamond | 90 | 45.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28840280 | 28840280 | PRJNA1150539_S_NODE_108008_length_230_cov_2.089172_g107412_i0 | PRJNA1150539 | 108008 | 230 | 2.089172 | 4.8050956 | Helicobacter pylori | 210 | Bacteria | Bacteria | 66.6 | 4.16e-12 | NR | WP_322538256.1 | 210 | g107412 | i0 | 58.2 | 0.717391304347826 | 55 | 23 | 71.7 | 0 | 217 | 53 | 53 | 107 | WP_322538256.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 165 | 66.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29333405 | 29333405 | PRJNA1150539_S_NODE_80529_length_265_cov_2.328125_g79933_i0 | PRJNA1150539 | 80529 | 265 | 2.328125 | 6.16953125 | root | 1 | Root_unresolved | Root_unresolved | 46.2 | 0.00238 | NR | WP_341557095.1 | 197 | g79933 | i0 | 50 | 0.99622641509434 | 44 | 22 | 49.8 | 0 | 152 | 21 | 193 | 236 | WP_341557095.1 RBD-like domain-containing protein, partial [Campylobacter jejuni] | diamond | 264 | 46.6 | 0.991416309012876 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 29503290 | 29503290 | PRJNA1150539_S_NODE_54650_length_303_cov_2.308696_g54054_i0 | PRJNA1150539 | 54650 | 303 | 2.308696 | 6.99534888 | Helicobacter pylori | 210 | Bacteria | Bacteria | 52 | 1.46e-5 | NR | GAA9208922.1 | 210 | g54054 | i0 | 51 | 6.68316831683168 | 49 | 19 | 43.6 | 1 | 72 | 203 | 12 | 60 | GAA9208922.1 hypothetical protein Kyoto198A_1360 [Helicobacter pylori] | diamond | 2025 | 52 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29554207 | 29554207 | PRJNA1150539_S_NODE_102490_length_241_cov_1.952381_g101894_i0 | PRJNA1150539 | 102490 | 241 | 1.952381 | 4.70523821 | Bacteria | 2 | Bacteria | Bacteria | 47.8 | 5.09e-5 | NR | GAA6801467.1 | 210 | g101894 | i0 | 62.5 | 2.42738589211618 | 32 | 12 | 39.8 | 0 | 131 | 226 | 24 | 55 | GAA6801467.1 hypothetical protein Kyoto200A_2170 [Helicobacter pylori] | diamond | 585 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29597802 | 29597802 | PRJNA1150539_S_NODE_88910_length_255_cov_1.247253_g88314_i0 | PRJNA1150539 | 88910 | 255 | 1.247253 | 3.18049515 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.8 | 7.32e-5 | NR | GAA8706992.1 | 210 | g88314 | i0 | 51.6 | 0.364705882352941 | 31 | 15 | 36.5 | 0 | 155 | 247 | 35 | 65 | GAA8706992.1 hypothetical protein Kyoto145A_3660 [Helicobacter pylori] | diamond | 93 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29629343 | 29629343 | PRJNA1150539_S_NODE_30750_length_351_cov_1.658273_g30154_i0 | PRJNA1150539 | 30750 | 351 | 1.658273 | 5.82053823 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.8 | 7.88e-4 | NR | GAA6966708.1 | 210 | g30154 | i0 | 38.3 | 0.692307692307692 | 81 | 46 | 65.8 | 2 | 304 | 74 | 25 | 105 | GAA6966708.1 hypothetical protein Kyoto211A_2740 [Helicobacter pylori] | diamond | 243 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29711904 | 29711904 | PRJNA1150539_S_NODE_54510_length_303_cov_3.239130_g53914_i0 | PRJNA1150539 | 54510 | 303 | 3.23913 | 9.8145639 | root | 1 | Root_unresolved | Root_unresolved | 62.4 | 9.84e-10 | NR | GAA8857246.1 | 210 | g53914 | i0 | 65.8 | 1.10891089108911 | 38 | 13 | 37.6 | 0 | 300 | 187 | 39 | 76 | GAA8857246.1 hypothetical protein Kyoto154A_2180 [Helicobacter pylori] | diamond | 336 | 62.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30103318 | 30103318 | PRJNA1150539_S_NODE_18892_length_386_cov_4.964856_g18296_i0 | PRJNA1150539 | 18892 | 386 | 4.964856 | 19.16434416 | Helicobacter pylori | 210 | Bacteria | Bacteria | 51.6 | 4.44e-6 | NR | GAA8856488.1 | 210 | g18296 | i0 | 56.1 | 1.0259067357513 | 41 | 18 | 31.9 | 0 | 170 | 48 | 7 | 47 | GAA8856488.1 hypothetical protein Kyoto154A_2050 [Helicobacter pylori] | diamond | 396 | 51.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30293461 | 30293461 | PRJNA1150539_S_NODE_19032_length_386_cov_2.153355_g18436_i0 | PRJNA1150539 | 19032 | 386 | 2.153355 | 8.3119503 | Helicobacter pylori | 210 | Bacteria | Bacteria | 65.5 | 1.52e-10 | NR | GAA8857246.1 | 210 | g18436 | i0 | 48.2 | 0.83160621761658 | 56 | 26 | 43.5 | 1 | 85 | 252 | 37 | 89 | GAA8857246.1 hypothetical protein Kyoto154A_2180 [Helicobacter pylori] | diamond | 321 | 65.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30451277 | 30451277 | PRJNA1150539_S_NODE_91593_length_251_cov_4.539326_g90997_i0 | PRJNA1150539 | 91593 | 251 | 4.539326 | 11.39370826 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42.7 | 0.00529 | NR | GAA9131483.1 | 210 | g90997 | i0 | 40.8 | 0.585657370517928 | 49 | 28 | 58.6 | 1 | 211 | 65 | 18 | 65 | GAA9131483.1 hypothetical protein Kyoto190A_2210 [Helicobacter pylori] | diamond | 147 | 42.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30482683 | 30482683 | PRJNA1150539_S_NODE_81633_length_264_cov_1.209424_g81037_i0 | PRJNA1150539 | 81633 | 264 | 1.209424 | 3.19287936 | Helicobacter pylori | 210 | Bacteria | Bacteria | 66.6 | 1.41e-11 | NR | GAA8857246.1 | 210 | g81037 | i0 | 59.2 | 1.75 | 49 | 17 | 52.3 | 1 | 25 | 162 | 61 | 109 | GAA8857246.1 hypothetical protein Kyoto154A_2180 [Helicobacter pylori] | diamond | 462 | 66.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30514222 | 30514222 | PRJNA1150539_S_NODE_63873_length_288_cov_4.627907_g63277_i0 | PRJNA1150539 | 63873 | 288 | 4.627907 | 13.32837216 | Helicobacter pylori | 210 | Bacteria | Bacteria | 70.9 | 8.5e-14 | NR | GAA6863873.1 | 210 | g63277 | i0 | 49.3 | 0.697916666666667 | 67 | 33 | 69.8 | 1 | 36 | 236 | 8 | 73 | GAA6863873.1 hypothetical protein Kyoto206A_2050 [Helicobacter pylori] | diamond | 201 | 70.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30545800 | 30545800 | PRJNA1150539_S_NODE_31753_length_348_cov_3.818182_g31157_i0 | PRJNA1150539 | 31753 | 348 | 3.818182 | 13.28727336 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.8 | 1.32e-4 | NR | GAA9020730.1 | 210 | g31157 | i0 | 60 | 1.14655172413793 | 40 | 15 | 33.6 | 1 | 201 | 85 | 13 | 52 | GAA9020730.1 hypothetical protein Kyoto181A_7750 [Helicobacter pylori] | diamond | 399 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30608880 | 30608880 | PRJNA1150539_S_NODE_97853_length_245_cov_3.255814_g97257_i0 | PRJNA1150539 | 97853 | 245 | 3.255814 | 7.9767443 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40.4 | 0.0468 | NR | GAA8968912.1 | 210 | g97257 | i0 | 55.6 | 0.440816326530612 | 36 | 15 | 42.9 | 1 | 199 | 95 | 23 | 58 | GAA8968912.1 hypothetical protein Kyoto181A_4280 [Helicobacter pylori] | diamond | 108 | 40.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30754862 | 30754862 | PRJNA1150539_S_NODE_73934_length_274_cov_1.611940_g73338_i0 | PRJNA1150539 | 73934 | 274 | 1.61194 | 4.4167156 | root | 1 | Root_unresolved | Root_unresolved | 41.6 | 0.0268 | NR | GAA8913412.1 | 210 | g73338 | i0 | 57.6 | 0.722627737226277 | 33 | 13 | 35 | 1 | 162 | 67 | 28 | 60 | GAA8913412.1 hypothetical protein Kyoto166A_2650 [Helicobacter pylori] | diamond | 198 | 41.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30925195 | 30925195 | PRJNA1150539_S_NODE_74074_length_274_cov_1.149254_g73478_i0 | PRJNA1150539 | 74074 | 274 | 1.149254 | 3.14895596 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 58.2 | 8.16e-9 | NR | WP_341549736.1 | 197 | g73478 | i0 | 51.7 | 1.37956204379562 | 60 | 26 | 65.7 | 1 | 94 | 273 | 7 | 63 | WP_341549736.1 hypothetical protein, partial [Campylobacter jejuni] | diamond | 378 | 58.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 31082942 | 31082942 | PRJNA1150539_S_NODE_104295_length_238_cov_2.569697_g103699_i0 | PRJNA1150539 | 104295 | 238 | 2.569697 | 6.11587886 | Helicobacter pylori | 210 | Bacteria | Bacteria | 67.4 | 1.94e-11 | NR | GAA9038606.1 | 210 | g103699 | i0 | 69.8 | 8.07983193277311 | 43 | 13 | 54.2 | 0 | 155 | 27 | 41 | 83 | GAA9038606.1 hypothetical protein Kyoto184A_01320 [Helicobacter pylori] | diamond | 1923 | 67.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31462578 | 31462578 | PRJNA1150539_S_NODE_30176_length_352_cov_3.580645_g29580_i0 | PRJNA1150539 | 30176 | 352 | 3.580645 | 12.6038704 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42.4 | 0.0158 | NR | GAA9136539.1 | 210 | g29580 | i0 | 55 | 0.340909090909091 | 40 | 18 | 34.1 | 0 | 334 | 215 | 2 | 41 | GAA9136539.1 hypothetical protein Kyoto190A_2700 [Helicobacter pylori] | diamond | 120 | 42.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31683588 | 31683588 | PRJNA1150539_S_NODE_7717_length_470_cov_30.760705_g7123_i0 | PRJNA1150539 | 7717 | 470 | 30.760705 | 144.5753135 | Helicobacter pylori | 210 | Bacteria | Bacteria | 166 | 2.72e-50 | NR | WP_322538256.1 | 210 | g7123 | i0 | 95.2 | 0.536170212765957 | 84 | 4 | 53.6 | 0 | 22 | 273 | 24 | 107 | WP_322538256.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 252 | 166 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32031846 | 32031846 | PRJNA1150539_S_NODE_86138_length_258_cov_2.048649_g85542_i0 | PRJNA1150539 | 86138 | 258 | 2.048649 | 5.28551442 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 62 | 4.63e-10 | NR | WP_341550930.1 | 197 | g85542 | i0 | 55.8 | 0.604651162790698 | 52 | 22 | 59.3 | 1 | 106 | 258 | 10 | 61 | WP_341550930.1 hypothetical protein, partial [Campylobacter jejuni] | diamond | 156 | 62 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 32253553 | 32253553 | PRJNA1150539_S_NODE_84658_length_260_cov_1.647059_g84062_i0 | PRJNA1150539 | 84658 | 260 | 1.647059 | 4.2823534 | Helicobacter pylori | 210 | Bacteria | Bacteria | 63.9 | 2.99e-11 | NR | GAA6904105.1 | 210 | g84062 | i0 | 63.3 | 0.565384615384615 | 49 | 18 | 56.5 | 0 | 7 | 153 | 23 | 71 | GAA6904105.1 hypothetical protein Kyoto207A_2120 [Helicobacter pylori] | diamond | 147 | 63.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32272892 | 32272892 | PRJNA1150539_S_NODE_64078_length_288_cov_2.446512_g63482_i0 | PRJNA1150539 | 64078 | 288 | 2.446512 | 7.04595456 | root | 1 | Root_unresolved | Root_unresolved | 60.1 | 4.55e-9 | NR | GAA8950930.1 | 210 | g63482 | i0 | 57.1 | 1.16666666666667 | 56 | 23 | 58.3 | 1 | 106 | 273 | 59 | 113 | GAA8950930.1 hypothetical protein Kyoto181A_1790 [Helicobacter pylori] | diamond | 336 | 60.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32474923 | 32474923 | PRJNA1150539_S_NODE_97859_length_245_cov_3.226744_g97263_i0 | PRJNA1150539 | 97859 | 245 | 3.226744 | 7.9055228 | Aliarcobacter sp. | 2321116 | Bacteria | Bacteria | 41.6 | 0.0378 | NR | MBP6713734.1 | 2321116 | g97263 | i0 | 37.5 | 0.685714285714286 | 56 | 33 | 68.6 | 1 | 56 | 223 | 20 | 73 | MBP6713734.1 DUF2513 domain-containing protein [Aliarcobacter sp.] | diamond | 168 | 41.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter sp. | ||
| 32663928 | 32663928 | PRJNA1150539_S_NODE_98300_length_245_cov_1.476744_g97704_i0 | PRJNA1150539 | 98300 | 245 | 1.476744 | 3.6180228 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42 | 0.00991 | NR | GAA8685008.1 | 210 | g97704 | i0 | 45.7 | 0.563265306122449 | 46 | 25 | 56.3 | 0 | 198 | 61 | 1 | 46 | GAA8685008.1 hypothetical protein Kyoto145A_1190 [Helicobacter pylori] | diamond | 138 | 42 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32695474 | 32695474 | PRJNA1150539_S_NODE_84340_length_260_cov_2.882353_g83744_i0 | PRJNA1150539 | 84340 | 260 | 2.882353 | 7.4941178 | Helicobacter pylori | 210 | Bacteria | Bacteria | 54.3 | 1.46e-6 | NR | GAA9039287.1 | 210 | g83744 | i0 | 56.8 | 1.65 | 44 | 19 | 50.8 | 0 | 245 | 114 | 45 | 88 | GAA9039287.1 hypothetical protein Kyoto184A_01650 [Helicobacter pylori] | diamond | 429 | 54.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32840735 | 32840735 | PRJNA1150539_S_NODE_35520_length_339_cov_4.120301_g34924_i0 | PRJNA1150539 | 35520 | 339 | 4.120301 | 13.96782039 | root | 1 | Root_unresolved | Root_unresolved | 60.1 | 7.63e-9 | NR | WP_240382657.1 | 197 | g34924 | i0 | 52.4 | 1.48672566371681 | 84 | 38 | 72.6 | 2 | 82 | 327 | 24 | 107 | WP_240382657.1 hypothetical protein, partial [Campylobacter jejuni] | diamond | 504 | 60.5 | 0.993388429752066 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 32852983 | 32852983 | PRJNA1150539_S_NODE_61540_length_292_cov_2.068493_g60944_i0 | PRJNA1150539 | 61540 | 292 | 2.068493 | 6.03999956 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42 | 0.0112 | NR | GAA6907280.1 | 210 | g60944 | i0 | 71.4 | 0.565068493150685 | 28 | 8 | 28.8 | 0 | 34 | 117 | 13 | 40 | GAA6907280.1 hypothetical protein Kyoto207A_2440 [Helicobacter pylori] | diamond | 165 | 42 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;