RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1150539" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 5 ✖

bioproject 1

  • PRJNA1150539 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2851828 2851828 PRJNA1150539_S_NODE_102923_length_241_cov_0.916667_g102327_i0 PRJNA1150539 102923 241 0.916667 2.20916747 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.006   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g102327 i0 100 0.933609958506224 29 0 12 0 211 239 29 1 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 225 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
14330761 14330761 PRJNA1150539_S_NODE_86932_length_257_cov_2.092391_g86336_i0 PRJNA1150539 86932 257 2.092391 5.37744487 Bocaparvovirus carnivoran3 3052028 Viruses Viruses 52.8 0.023   NTclustered gi|1775500220|gb|MN127777.1| 1174530 g86336 i0 100 0.108949416342412 28 0 11 0 125 152 4625 4652 Feline bocavirus isolate 19R81C/THA/2019, complete genome blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Bocaparvovirus Bocaparvovirus carnivoran3
15603900 15603900 PRJNA1150539_S_NODE_23313_length_371_cov_3.369128_g22717_i0 PRJNA1150539 23313 371 3.369128 12.49946488 Parvovirus macaca3116 3117124 Viruses Viruses 56.5 0.003   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g22717 i0 100 0.15633423180593 30 0 8 0 340 369 3087 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 58 56.5 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
18153297 18153297 PRJNA1150539_S_NODE_69335_length_280_cov_3.908213_g68739_i0 PRJNA1150539 69335 280 3.908213 10.9429964 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.007   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g68739 i0 100 0.203571428571429 29 0 10 0 250 278 3088 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 57 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
23253612 23253612 PRJNA1150539_S_NODE_47279_length_316_cov_1.584362_g46683_i0 PRJNA1150539 47279 316 1.584362 5.00658392 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.03   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g46683 i0 100 0.0886075949367089 28 0 9 0 1 28 3116 3089 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;