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contig_metadata

8 rows where bioproject = "PRJNA1150539" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

bioproject 1

  • PRJNA1150539 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7954010 7954010 PRJNA1150539_S_NODE_106587_length_233_cov_2.506250_g105991_i0 PRJNA1150539 106587 233 2.50625 5.8395625 Methanococcus maripaludis 39152 Archaea Archaea 54.7 0.006   NTclustered gi|1342459100|gb|CP026606.1| 39152 g105991 i0 94.286 0.150214592274678 35 2 15 0 107 141 1423590 1423556 Methanococcus maripaludis strain DSM 2067 chromosome, complete genome blastn 35 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
11779531 11779531 PRJNA1150539_S_NODE_107950_length_230_cov_2.343949_g107354_i0 PRJNA1150539 107950 230 2.343949 5.3910827 Halorussus gelatinilyticus 2937524 Archaea Archaea 52.8 0.021   NTclustered gi|2234308622|gb|CP096658.1| 2937524 g107354 i0 100 0.121739130434783 28 0 12 0 24 51 3593268 3593295 Halorussus gelatinilyticus strain XZYJT40 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus gelatinilyticus
27293163 27293163 PRJNA1150539_S_NODE_86363_length_258_cov_1.270270_g85767_i0 PRJNA1150539 86363 258 1.27027 3.2772966 Salinirubellus salinus 1364945 Archaea Archaea 43.5 0.0236   NR WP_260593692.1 1364945 g85767 i0 45.6 0.662790697674419 57 27 61.6 1 67 225 66 122 WP_260593692.1 poly-gamma-glutamate biosynthesis protein PgsC/CapC [Salinirubellus salinus] diamond 171 43.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus Salinirubellus salinus
27924748 27924748 PRJNA1150539_S_NODE_97805_length_245_cov_3.726744_g97209_i0 PRJNA1150539 97805 245 3.726744 9.1305228 Halobacterium sp. CBA1126 2668074 Archaea Archaea 42 0.0327   NR WP_157502138.1 2668074 g97209 i0 41.9 0.52653061224489806 43 24 52.7 1 165 37 77 118 WP_157502138.1 PrsW family glutamic-type intramembrane protease, partial [Halobacterium sp. CBA1126] diamond 129 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. CBA1126
29250653 29250653 PRJNA1150539_S_NODE_84509_length_260_cov_2.058824_g83913_i0 PRJNA1150539 84509 260 2.058824 5.3529424 Thermoplasmatota archaeon 2806419 Archaea Archaea 41.6 0.0248   NR MCU0799209.1 2806419 g83913 i0 54.1 0.426923076923077 37 15 40.4 1 75 179 35 71 MCU0799209.1 hypothetical protein [Thermoplasmatota archaeon] diamond 111 41.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30008885 30008885 PRJNA1150539_S_NODE_107591_length_231_cov_2.101266_g106995_i0 PRJNA1150539 107591 231 2.101266 4.85392446 Thermoplasmata archaeon 1906666 Archaea Archaea 43.1 0.0221   NR MCK5309894.1 1906666 g106995 i0 37.7 0.688311688311688 53 33 68.8 0 20 178 262 314 MCK5309894.1 Gfo/Idh/MocA family oxidoreductase [Thermoplasmata archaeon] diamond 159 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31272613 31272613 PRJNA1150539_S_NODE_93995_length_249_cov_1.818182_g93399_i0 PRJNA1150539 93995 249 1.818182 4.52727318 Theionarchaea archaeon 2747605 Archaea Archaea 43.1 0.0245   NR MBU7045767.1 2747605 g93399 i0 30.2 0.759036144578313 63 37 75.9 1 35 223 56 111 MBU7045767.1 hypothetical protein [Theionarchaea archaeon] diamond 189 43.1 1 Archaea   Methanobacteriati Methanobacteriota Theionarchaea       Theionarchaea archaeon
31304167 31304167 PRJNA1150539_S_NODE_107195_length_231_cov_7.367089_g106599_i0 PRJNA1150539 107195 231 7.367089 17.01797559 Thermoplasmatota archaeon 2806419 Archaea Archaea 42 0.0212   NR MEE3038678.1 2806419 g106599 i0 39.3 0.727272727272727 56 32 71.4 2 55 219 26 80 MEE3038678.1 PQQ-binding-like beta-propeller repeat protein [Thermoplasmatota archaeon] diamond 168 42 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;