RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1150539", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA1150539 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2852529 2852529 PRJNA1150539_S_NODE_6763_length_491_cov_2.849282_g6169_i0 PRJNA1150539 6763 491 2.849282 13.98997462 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 483 1.43e-131   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g6169 i0 84.646 134.531568228106 495 65 100 9 1 491 5031258 5031745 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 66055 483 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
6679035 6679035 PRJNA1150539_S_NODE_3266_length_673_cov_4.206667_g2709_i0 PRJNA1150539 3266 673 4.206667 28.31086891 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 998 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g2709 i0 93.491 420.158989598811 676 37 100 7 1 673 5031891 5032562 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 282767 998 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14330388 14330388 PRJNA1150539_S_NODE_4992_length_551_cov_9.372385_g4407_i0 PRJNA1150539 4992 551 9.372385 51.64184135 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 712 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g4407 i0 90.441 227.978221415608 544 46 98 5 1 542 5032644 5033183 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 125616 712 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
28271837 28271837 PRJNA1150539_S_NODE_58626_length_296_cov_4.461883_g58030_i0 PRJNA1150539 58626 296 4.461883 13.20717368 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 45.8 0.00557   NR HLX25562.1 2952917 g58030 i0 50 0.466216216216216 46 22 45.6 1 289 155 360 405 HLX25562.1 peptide ABC transporter substrate-binding protein [Candidatus Cybelea sp.] diamond 138 45.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;