RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1150539", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA1150539 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14330631 14330631 PRJNA1150539_S_NODE_73952_length_274_cov_1.532338_g73356_i0 PRJNA1150539 73952 274 1.532338 4.19860612 Patiria miniata 46514 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|1944917742|ref|XM_038215728.1| 46514 g73356 i0 97.059 0.861313868613139 34 0 12 1 177 210 5989 5957 PREDICTED: Patiria miniata fibrillin-1-like (LOC119740426), transcript variant X3, mRNA blastn 236 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
27324806 27324806 PRJNA1150539_S_NODE_108403_length_229_cov_2.282051_g107807_i0 PRJNA1150539 108403 229 2.282051 5.22589679 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 44.3 0.00787   NR XP_041471852.1 7654 g107807 i0 41.7 0.62882096069869 48 26 61.6 2 219 79 128 174 XP_041471852.1 tetraspanin-9-like [Lytechinus variegatus] diamond 144 44.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
30166517 30166517 PRJNA1150539_S_NODE_68332_length_282_cov_1.598086_g67736_i0 PRJNA1150539 68332 282 1.598086 4.50660252 Anneissia japonica 1529436 Echinodermata other_Eukaryota 43.1 0.0404   NR XP_033125808.1 1529436 g67736 i0 45.7 0.372340425531915 35 19 37.2 0 269 165 38 72 XP_033125808.1 fatty acid hydroxylase domain-containing protein 2-like [Anneissia japonica] diamond 105 43.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
31557484 31557484 PRJNA1150539_S_NODE_54816_length_303_cov_1.339130_g54220_i0 PRJNA1150539 54816 303 1.33913 4.0575639 Diadema antillarum 105358 Echinodermata other_Eukaryota 45.8 0.0042   NR XP_071509596.1 105358 g54220 i0 57.6 0.326732673267327 33 14 32.7 0 14 112 40 72 XP_071509596.1 rho-related protein rac1C-like isoform X2 [Diadema antillarum] diamond 99 45.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;