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contig_metadata

12 rows where bioproject = "PRJNA1150539" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA1150539 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1036829 1036829 PRJNA1150539_S_NODE_56661_length_300_cov_1.017621_g56065_i0 PRJNA1150539 56661 300 1.017621 3.052863 Naegleria 5761 Heterolobosea other_Eukaryota 555 1.7399999999999995e-153   NTclustered gi|2618963742|gb|OR769034.1| 5762 g56065 i0 100 25.37 300 0 100 0 1 300 3906 4205 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7611 555 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1575839 1575839 PRJNA1150539_S_NODE_36202_length_338_cov_1.694340_g35606_i0 PRJNA1150539 36202 338 1.69434 5.7268692 Naegleria clarki 36333 Heterolobosea other_Eukaryota 553 7.179999999999998e-153   NTclustered gi|2651357780|gb|PP174296.1| 36333 g35606 i0 99.026 39.9230769230769 308 3 91 0 1 308 3955 3648 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13494 553 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
6139615 6139615 PRJNA1150539_S_NODE_58945_length_296_cov_2.026906_g58349_i0 PRJNA1150539 58945 296 2.026906 5.99964176 Naegleria 5761 Heterolobosea other_Eukaryota 547 2.8799999999999986e-151   NTclustered gi|2651357780|gb|PP174296.1| 36333 g58349 i0 100 51.1824324324324 296 0 100 0 1 296 2206 1911 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15150 547 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
14330347 14330347 PRJNA1150539_S_NODE_46672_length_317_cov_1.577869_g46076_i0 PRJNA1150539 46672 317 1.577869 5.00184473 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.03   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g46076 i0 100 0.0883280757097792 28 0 9 0 3 30 8 35 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
15064607 15064607 PRJNA1150539_S_NODE_96192_length_247_cov_1.637931_g95596_i0 PRJNA1150539 96192 247 1.637931 4.04568957 Naegleria 5761 Heterolobosea other_Eukaryota 435 1.9e-117   NTclustered gi|2618963742|gb|OR769034.1| 5762 g95596 i0 99.58 676.210526315789 238 1 96 0 1 238 5042 5279 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 167024 435 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21438721 21438721 PRJNA1150539_S_NODE_71937_length_277_cov_1.210784_g71341_i0 PRJNA1150539 71937 277 1.210784 3.35387168 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 322 1.76e-83   NTclustered gi|2593250474|emb|OY748421.1| 5660 g71341 i0 88.214 123.787003610108 280 20 97 10 8 277 990114 989838 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 34289 324 0.993827160493827 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
21978529 21978529 PRJNA1150539_S_NODE_81578_length_264_cov_1.471204_g80982_i0 PRJNA1150539 81578 264 1.471204 3.88397856 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 222 1.74e-53   NTclustered gi|1624748039|ref|XM_029024948.1| 67003 g80982 i0 87.179 27.7727272727273 195 25 74 0 12 206 241 435 Trypanosoma theileri 40S ribosomal protein S14 (TM35_000112390), partial mRNA blastn 7332 222 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
22713605 22713605 PRJNA1150539_S_NODE_28258_length_357_cov_2.433099_g27662_i0 PRJNA1150539 28258 357 2.433099 8.68616343 Naegleria 5761 Heterolobosea other_Eukaryota 623 5.709999999999999e-174   NTclustered gi|165968557|gb|EU377597.1| 36333 g27662 i0 100 94.4005602240896 337 0 94 0 1 337 507 171 Naegleria clarki strain CRIB43 18S ribosomal RNA gene, partial sequence blastn 33701 623 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
24527741 24527741 PRJNA1150539_S_NODE_89700_length_254_cov_1.276243_g89104_i0 PRJNA1150539 89700 254 1.276243 3.24165722 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 52.8 0.023   NTclustered gi|2787697484|ref|XM_067336510.1| 715481 g89104 i0 100 0.110236220472441 28 0 11 0 117 144 2227 2200 Trypanosoma melophagium uncharacterized protein (LSM04_009191), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
27293158 27293158 PRJNA1150539_S_NODE_56523_length_300_cov_1.788546_g55927_i0 PRJNA1150539 56523 300 1.788546 5.365638 Leishmania martiniquensis 1580590 Euglenozoa other_Eukaryota 44.3 0.0212   NR XP_067175545.1 1580590 g55927 i0 31.6 0.79 79 50 75 2 263 39 161 239 XP_067175545.1 hypothetical protein LSCM1_02589 [Leishmania martiniquensis] diamond 237 44.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania martiniquensis
27609103 27609103 PRJNA1150539_S_NODE_65864_length_285_cov_4.245283_g65268_i0 PRJNA1150539 65864 285 4.245283 12.09905655 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 45.1 0.00923   NR KAF5220438.1 5693 g65268 i0 52.6 0.4 38 17 40 1 38 151 92 128 KAF5220438.1 hypothetical protein ECC02_006506 [Trypanosoma cruzi] diamond 114 45.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
29882560 29882560 PRJNA1150539_S_NODE_74111_length_274_cov_1.134328_g73515_i0 PRJNA1150539 74111 274 1.134328 3.10805872 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 44.7 0.00606   NR RNC35547.1 5693 g73515 i0 38.6 0.963503649635037 88 48 90.9 2 11 259 78 164 RNC35547.1 retrotransposon hot spot (RHS) protein [Trypanosoma cruzi] diamond 264 44.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;