RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1150539", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1150539 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27829968 27829968 PRJNA1150539_S_NODE_48164_length_314_cov_3.385892_g47568_i0 PRJNA1150539 48164 314 3.385892 10.63170088 Candidatus Saccharimonadaceae bacterium 2830836 Bacteria Bacteria 152 3.64e-45   NR HJM04360.1 2830836 g47568 i0 73.8 0.984076433121019 103 27 98.4 0 311 3 8 110 HJM04360.1 divergent PAP2 family protein [Candidatus Saccharimonadaceae bacterium] diamond 309 152 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae   Candidatus Saccharimonadaceae bacterium
30356768 30356768 PRJNA1150539_S_NODE_57932_length_297_cov_6.933036_g57336_i0 PRJNA1150539 57932 297 6.933036 20.59111692 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 95.9 8.56e-21   NR TAH36644.1 2026720 g57336 i0 53.5 0.868686868686869 86 39 85.9 1 255 1 3 88 TAH36644.1 MAG: glycosyltransferase family 1 protein [Candidatus Saccharibacteria bacterium] diamond 258 95.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31841739 31841739 PRJNA1150539_S_NODE_65117_length_286_cov_5.469484_g64521_i0 PRJNA1150539 65117 286 5.469484 15.64272424 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 43.5 0.0332   NR MCR5833013.1 2026720 g64521 i0 40.4 0.597902097902098 57 34 59.8 0 75 245 18 74 MCR5833013.1 fibrobacter succinogenes major paralogous domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 171 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;