RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1150539", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1150539 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27261630 27261630 PRJNA1150539_S_NODE_29003_length_355_cov_3.237589_g28407_i0 PRJNA1150539 29003 355 3.237589 11.49344095 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 43.9 0.0325   NR HEX6080831.1 2072417 g28407 i0 29.8 0.794366197183099 94 62 76.1 2 76 345 1 94 HEX6080831.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 282 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29250642 29250642 PRJNA1150539_S_NODE_112749_length_206_cov_5.150376_g112153_i0 PRJNA1150539 112749 206 5.150376 10.60977456 Candidatus Methylomirabilales bacterium 3159508 Bacteria Bacteria 40.8 0.039   NR MFQ5801539.1 3159508 g112153 i0 51.4 0.509708737864078 35 16 49.5 1 54 155 6 40 MFQ5801539.1 hypothetical protein [Candidatus Methylomirabilales bacterium] diamond 105 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales     Candidatus Methylomirabilales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;