contig_metadata
5 rows where bioproject = "PRJNA1150539" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2312075 | 2312075 | PRJNA1150539_S_NODE_61342_length_292_cov_3.420091_g60746_i0 | PRJNA1150539 | 61342 | 292 | 3.420091 | 9.98666572 | Tubulinea | 555369 | Tubulinea | other_Eukaryota | 514 | 2.87e-141 | NTclustered | gi|418968559|gb|KC164244.1| | 5778 | g60746 | i0 | 98.299 | 98.8493150684932 | 294 | 3 | 100 | 2 | 1 | 292 | 87 | 380 | Vermamoeba vermiformis clone CF3-181 18S ribosomal RNA gene, partial sequence | blastn | 28864 | 514 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 5404451 | 5404451 | PRJNA1150539_S_NODE_51845_length_308_cov_1.617021_g51249_i0 | PRJNA1150539 | 51845 | 308 | 1.617021 | 4.98042468 | uncultured Amoebozoa | 590481 | Root_unresolved | Root_unresolved | 529 | 1.0899999999999996e-145 | NTclustered | gi|221185864|gb|FJ577811.1| | 590481 | g51249 | i0 | 99.317 | 24.0616883116883 | 293 | 1 | 95 | 1 | 1 | 292 | 933 | 641 | Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence | blastn | 7411 | 529 | 1 | Eukaryota | Amoebozoa | uncultured Amoebozoa | |||||||
| 10505554 | 10505554 | PRJNA1150539_S_NODE_84229_length_260_cov_3.802139_g83633_i0 | PRJNA1150539 | 84229 | 260 | 3.802139 | 9.8855614 | Dictyostelium discoideum | 44689 | Evosea | other_Eukaryota | 65.8 | 3.04e-6 | NTclustered | gi|66803301|ref|XM_630402.1| | 352472 | g83633 | i0 | 100 | 13.7307692307692 | 35 | 0 | 13 | 0 | 175 | 209 | 2744 | 2710 | Dictyostelium discoideum AX4 hypothetical protein (pks39) mRNA, complete cds | blastn | 3570 | 65.8 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 11779830 | 11779830 | PRJNA1150539_S_NODE_37570_length_335_cov_1.763359_g36974_i0 | PRJNA1150539 | 37570 | 335 | 1.763359 | 5.90725265 | Cochliopodium actinophorum | 703021 | Discosea | other_Eukaryota | 608 | 1.489999999999999e-169 | NTclustered | gi|330902845|gb|JF298249.1| | 703021 | g36974 | i0 | 99.403 | 67.2716417910448 | 335 | 2 | 100 | 0 | 1 | 335 | 167 | 501 | Cochliopodium actinophorum clone 1202 18S ribosomal RNA gene, partial sequence | blastn | 22536 | 608 | 1 | Eukaryota | Amoebozoa | Discosea | Himatismenida | Cochliopodiidae | Cochliopodium | Cochliopodium actinophorum | |||
| 21978680 | 21978680 | PRJNA1150539_S_NODE_96318_length_247_cov_1.327586_g95722_i0 | PRJNA1150539 | 96318 | 247 | 1.327586 | 3.27913742 | Dictyostelium purpureum | 5786 | Evosea | other_Eukaryota | 60.2 | 1.33e-4 | NTclustered | gi|330795445|ref|XM_003285736.1| | 5786 | g95722 | i0 | 92.683 | 1.92307692307692 | 41 | 3 | 17 | 0 | 52 | 92 | 247 | 287 | Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_97172), partial mRNA | blastn | 475 | 60.2 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;