contig_metadata
53 rows where bioproject = "PRJNA1148965"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1036582 | 1036582 | PRJNA1148965_S_NODE_321_length_329_cov_4.253906_g318_i0 | PRJNA1148965 | 321 | 329 | 4.253906 | 13.99535074 | Bos | 9903 | Chordata | Chordata | 549 | 9.009999999999996e-152 | NTclustered | gi|2633679555|ref|XR_009735293.1| | 9906 | g318 | i0 | 98.403 | 79.2218844984803 | 313 | 4 | 95 | 1 | 1 | 312 | 881 | 1193 | PREDICTED: Bos javanicus uncharacterized LOC133244066 (LOC133244066), ncRNA | blastn | 26064 | 549 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 1036583 | 1036583 | PRJNA1148965_S_NODE_401_length_309_cov_1.220339_g398_i0 | PRJNA1148965 | 401 | 309 | 1.220339 | 3.77084751 | Bacteria | 2 | Bacteria | Bacteria | 503 | 6.629999999999998e-138 | NTclustered | gi|2501871037|gb|CP084890.1| | 287 | g398 | i0 | 100 | 1025.88349514563 | 272 | 0 | 89 | 0 | 25 | 296 | 7102686 | 7102415 | Pseudomonas aeruginosa strain CH1 chromosome | blastn | 316998 | 503 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 1036584 | 1036584 | PRJNA1148965_S_NODE_821_length_244_cov_1.000000_g818_i0 | PRJNA1148965 | 821 | 244 | 1 | 2.44 | Bos | 9903 | Chordata | Chordata | 385 | 1.91e-102 | NTclustered | gi|2633855138|ref|XR_009736011.1| | 9906 | g818 | i0 | 98.182 | 541.459016393443 | 220 | 4 | 90 | 0 | 22 | 241 | 1685 | 1904 | PREDICTED: Bos javanicus uncharacterized LOC133246330 (LOC133246330), ncRNA | blastn | 132116 | 388 | 0.992268041237113 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 1575441 | 1575441 | PRJNA1148965_S_NODE_502_length_283_cov_1.114286_g499_i0 | PRJNA1148965 | 502 | 283 | 1.114286 | 3.15342938 | Bos taurus | 9913 | Chordata | Chordata | 518 | 2.14e-142 | NTclustered | gi|226424000|gb|AC150492.4| | 9913 | g499 | i0 | 99.648 | 1.00353356890459 | 284 | 0 | 100 | 1 | 1 | 283 | 127725 | 128008 | Bos taurus BAC CH240-454H24 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence | blastn | 284 | 518 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 2311813 | 2311813 | PRJNA1148965_S_NODE_122_length_435_cov_12.135359_g119_i0 | PRJNA1148965 | 122 | 435 | 12.135359 | 52.78881165 | Pseudomonas | 286 | Bacteria | Bacteria | 58.4 | 0.001 | NTclustered | gi|2792427225|gb|CP167888.1| | 287 | g119 | i0 | 97.143 | 0.289655172413793 | 35 | 0 | 8 | 1 | 16 | 49 | 4558687 | 4558721 | Pseudomonas aeruginosa strain 33008169 chromosome | blastn | 126 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 2851776 | 2851776 | PRJNA1148965_S_NODE_663_length_257_cov_1.407609_g660_i0 | PRJNA1148965 | 663 | 257 | 1.407609 | 3.61755513 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 93.5 | 1.38e-14 | NTclustered | gi|2557633336|emb|OY694998.1| | 2697049 | g660 | i0 | 93.651 | 24.011673151751 | 63 | 2 | 25 | 2 | 1 | 63 | 19713 | 19653 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 6171 | 93.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2851777 | 2851777 | PRJNA1148965_S_NODE_803_length_245_cov_1.017442_g800_i0 | PRJNA1148965 | 803 | 245 | 1.017442 | 2.4927329 | Pseudomonas tolaasii | 29442 | Bacteria | Bacteria | 58.4 | 4.75e-4 | NTclustered | gi|1168987590|gb|CP020369.1| | 29442 | g800 | i0 | 94.595 | 0.453061224489796 | 37 | 2 | 19 | 0 | 195 | 231 | 5489280 | 5489316 | Pseudomonas tolaasii strain 2192T chromosome | blastn | 111 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas tolaasii | ||
| 3586984 | 3586984 | PRJNA1148965_S_NODE_563_length_271_cov_2.116162_g560_i0 | PRJNA1148965 | 563 | 271 | 2.116162 | 5.73479902 | Escherichia | 561 | Bacteria | Bacteria | 501 | 2.05e-137 | NTclustered | gi|2161252967|gb|CP088071.1| | 562 | g560 | i0 | 100 | 100 | 271 | 0 | 100 | 0 | 1 | 271 | 916884 | 917154 | Escherichia coli strain 427603 chromosome, complete genome | blastn | 27100 | 501 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3586985 | 3586985 | PRJNA1148965_S_NODE_63_length_535_cov_1.145022_g61_i0 | PRJNA1148965 | 63 | 535 | 1.145022 | 6.1258677 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 989 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g61 | i0 | 100 | 100 | 535 | 0 | 100 | 0 | 1 | 535 | 2904855 | 2905389 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 53500 | 989 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4127780 | 4127780 | PRJNA1148965_S_NODE_764_length_248_cov_0.891429_g761_i0 | PRJNA1148965 | 764 | 248 | 0.891429 | 2.21074392 | Drosophila montana | 40370 | Arthropoda | Arthropoda | 54.7 | 0.006 | NTclustered | gi|2721904602|ref|XM_064682810.1| | 40370 | g761 | i0 | 100 | 0.116935483870968 | 29 | 0 | 12 | 0 | 9 | 37 | 561 | 533 | PREDICTED: Drosophila montana uncharacterized LOC135428716 (LOC135428716), mRNA | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Arthropoda | Insecta | Diptera | Drosophilidae | Drosophila | Drosophila montana | |
| 5403901 | 5403901 | PRJNA1148965_S_NODE_225_length_364_cov_2.233677_g222_i0 | PRJNA1148965 | 225 | 364 | 2.233677 | 8.13058428 | Mus musculus | 10090 | Chordata | Chordata | 641 | 1.6099999999999993e-179 | NTclustered | gi|47124098|gb|BC069931.1| | 10090 | g222 | i0 | 99.433 | 90.5576923076923 | 353 | 2 | 97 | 0 | 12 | 364 | 799 | 447 | Mus musculus cDNA clone MGC:78219 IMAGE:3489785, complete cds | blastn | 32963 | 641 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6139358 | 6139358 | PRJNA1148965_S_NODE_185_length_386_cov_1.015974_g182_i0 | PRJNA1148965 | 185 | 386 | 1.015974 | 3.92165964 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 660 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g182 | i0 | 99.722 | 124.339378238342 | 360 | 1 | 93 | 0 | 1 | 360 | 2906511 | 2906870 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 47995 | 660 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6139359 | 6139359 | PRJNA1148965_S_NODE_45_length_572_cov_1.444890_g43_i0 | PRJNA1148965 | 45 | 572 | 1.44489 | 8.2647708 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 1011 | 0 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g43 | i0 | 100 | 361.493006993007 | 547 | 0 | 96 | 0 | 26 | 572 | 3935426 | 3934880 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 206774 | 1011 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7414403 | 7414403 | PRJNA1148965_S_NODE_766_length_248_cov_0.891429_g763_i0 | PRJNA1148965 | 766 | 248 | 0.891429 | 2.21074392 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 418 | 1.9199999999999994e-112 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g763 | i0 | 100 | 91.1290322580645 | 226 | 0 | 91 | 0 | 23 | 248 | 2112208 | 2111983 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 22600 | 418 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7414404 | 7414404 | PRJNA1148965_S_NODE_806_length_245_cov_0.906977_g803_i0 | PRJNA1148965 | 806 | 245 | 0.906977 | 2.22209365 | Mus | 10088 | Chordata | Chordata | 453 | 5.1900000000000006e-123 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g803 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 788 | 1032 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 24500 | 453 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7953936 | 7953936 | PRJNA1148965_S_NODE_87_length_467_cov_1.299492_g84_i0 | PRJNA1148965 | 87 | 467 | 1.299492 | 6.06862764 | Pseudomonas phage vB_PaeM_RP14 | 2951336 | Viruses | Viruses | 62.1 | 7.54e-5 | NTclustered | gi|2374403479|gb|ON524870.1| | 2951336 | g84 | i0 | 100 | 0.203426124197002 | 33 | 0 | 7 | 0 | 3 | 35 | 81 | 113 | Pseudomonas phage vB_PaeM_RP14, complete genome | blastn | 95 | 62.1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Vandenendeviridae | Nankokuvirus | Pseudomonas phage vB_PaeM_RP14 | |||
| 8689604 | 8689604 | PRJNA1148965_S_NODE_467_length_291_cov_1.073394_g464_i0 | PRJNA1148965 | 467 | 291 | 1.073394 | 3.12357654 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 538 | 1.6999999999999994e-148 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g464 | i0 | 100 | 100 | 291 | 0 | 100 | 0 | 1 | 291 | 2935321 | 2935611 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 29100 | 538 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8689605 | 8689605 | PRJNA1148965_S_NODE_707_length_253_cov_0.866667_g704_i0 | PRJNA1148965 | 707 | 253 | 0.866667 | 2.19266751 | Bacillati | 1783272 | Bacteria | Bacteria | 377 | 3.33e-100 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g704 | i0 | 98.592 | 147.343873517787 | 213 | 3 | 84 | 0 | 17 | 229 | 1105 | 893 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 37278 | 377 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 9964720 | 9964720 | PRJNA1148965_S_NODE_48_length_568_cov_1.331313_g46_i0 | PRJNA1148965 | 48 | 568 | 1.331313 | 7.56185784 | Bacillus | 1386 | Bacteria | Bacteria | 459 | 2.8199999999999996e-124 | NTclustered | gi|2257786247|gb|CP085402.1| | 1392 | g46 | i0 | 100 | 43.6619718309859 | 248 | 0 | 44 | 0 | 321 | 568 | 3965601 | 3965354 | Bacillus anthracis strain CMF9 chromosome, complete genome | blastn | 24800 | 459 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 9964721 | 9964721 | PRJNA1148965_S_NODE_788_length_246_cov_0.901734_g785_i0 | PRJNA1148965 | 788 | 246 | 0.901734 | 2.21826564 | Escherichia | 561 | Bacteria | Bacteria | 424 | 4.09e-114 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g785 | i0 | 100 | 93.0894308943089 | 229 | 0 | 93 | 0 | 18 | 246 | 2110151 | 2110379 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 22900 | 424 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10504626 | 10504626 | PRJNA1148965_S_NODE_689_length_255_cov_1.285714_g686_i0 | PRJNA1148965 | 689 | 255 | 1.285714 | 3.2785707 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 76.8 | 1.37e-9 | NTclustered | gi|2565363363|emb|OY636195.1| | 2697049 | g686 | i0 | 92.593 | 15.1450980392157 | 54 | 2 | 21 | 2 | 1 | 54 | 19679 | 19628 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3862 | 76.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 10504627 | 10504627 | PRJNA1148965_S_NODE_769_length_247_cov_2.097701_g766_i0 | PRJNA1148965 | 769 | 247 | 2.097701 | 5.18132147 | Heterocephalus glaber | 10181 | Chordata | Chordata | 52.8 | 0.022 | NTclustered | gi|1196716665|ref|XR_002394006.1| | 10181 | g766 | i0 | 96.774 | 0.125506072874494 | 31 | 1 | 13 | 0 | 217 | 247 | 7 | 37 | PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X14, ncRNA | blastn | 31 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Bathyergidae | Heterocephalus | Heterocephalus glaber | |
| 11239852 | 11239852 | PRJNA1148965_S_NODE_109_length_443_cov_1.562162_g106_i0 | PRJNA1148965 | 109 | 443 | 1.562162 | 6.92037766 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 802 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g106 | i0 | 99.323 | 100 | 443 | 3 | 100 | 0 | 1 | 443 | 2905928 | 2905486 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 44300 | 802 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11239853 | 11239853 | PRJNA1148965_S_NODE_669_length_257_cov_0.891304_g666_i0 | PRJNA1148965 | 669 | 257 | 0.891304 | 2.29065128 | Bacillus | 1386 | Bacteria | Bacteria | 470 | 5.45e-128 | NTclustered | gi|984728683|gb|CP014179.1| | 1392 | g666 | i0 | 99.611 | 100 | 257 | 1 | 100 | 0 | 1 | 257 | 3949950 | 3949694 | Bacillus anthracis strain Stendal chromosome, complete genome | blastn | 25700 | 470 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 11239854 | 11239854 | PRJNA1148965_S_NODE_89_length_465_cov_1.724490_g86_i0 | PRJNA1148965 | 89 | 465 | 1.72449 | 8.0188785 | Bacillus | 1386 | Bacteria | Bacteria | 710 | 0 | NTclustered | gi|984728683|gb|CP014179.1| | 1392 | g86 | i0 | 99.742 | 1043.69677419355 | 387 | 1 | 83 | 0 | 59 | 445 | 13087 | 12701 | Bacillus anthracis strain Stendal chromosome, complete genome | blastn | 485319 | 710 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 11239855 | 11239855 | PRJNA1148965_S_NODE_9_length_942_cov_2.235903_g7_i0 | PRJNA1148965 | 9 | 942 | 2.235903 | 21.06220626 | Bacillus | 1386 | Bacteria | Bacteria | 872 | 0 | NTclustered | gi|2257786247|gb|CP085402.1| | 1392 | g7 | i0 | 99.789 | 93.8460721868365 | 475 | 1 | 94 | 0 | 62 | 536 | 3972107 | 3972581 | Bacillus anthracis strain CMF9 chromosome, complete genome | blastn | 88403 | 872 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 11779447 | 11779447 | PRJNA1148965_S_NODE_130_length_427_cov_1.926554_g127_i0 | PRJNA1148965 | 130 | 427 | 1.926554 | 8.22638558 | Bos taurus | 9913 | Chordata | Chordata | 754 | 0 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g127 | i0 | 98.818 | 60.7142857142857 | 423 | 5 | 99 | 0 | 5 | 427 | 4549 | 4971 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 25925 | 754 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 12515266 | 12515266 | PRJNA1148965_S_NODE_170_length_394_cov_1.884735_g167_i0 | PRJNA1148965 | 170 | 394 | 1.884735 | 7.4258559 | root | 1 | Root_unresolved | Root_unresolved | 69.4 | 3.74e-7 | NTclustered | gi|1196716699|ref|XR_002394040.1| | 10181 | g167 | i0 | 97.561 | 9.57868020304569 | 41 | 0 | 10 | 1 | 352 | 392 | 11 | 50 | PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X48, ncRNA | blastn | 3774 | 69.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Bathyergidae | Heterocephalus | Heterocephalus glaber | |
| 13054526 | 13054526 | PRJNA1148965_S_NODE_691_length_255_cov_0.857143_g688_i0 | PRJNA1148965 | 691 | 255 | 0.857143 | 2.18571465 | synthetic construct | 32630 | Root_unresolved | Root_unresolved | 71.3 | 6.4e-8 | NTclustered | gi|2163361756|dbj|LC597675.1| | 32630 | g688 | i0 | 100 | 33.9607843137255 | 38 | 0 | 28 | 0 | 210 | 247 | 44 | 7 | Synthetic construct LB023 DNA, synthetic long-barcode fragment | blastn | 8660 | 71.3 | 1 | synthetic construct | |||||||||
| 15064239 | 15064239 | PRJNA1148965_S_NODE_12_length_897_cov_11.253641_g10_i0 | PRJNA1148965 | 12 | 897 | 11.253641 | 100.94515977 | Bacillus | 1386 | Bacteria | Bacteria | 1447 | 0 | NTclustered | gi|2257786247|gb|CP085402.1| | 1392 | g10 | i0 | 99.747 | 87.8472686733556 | 789 | 2 | 88 | 0 | 33 | 821 | 3357929 | 3357141 | Bacillus anthracis strain CMF9 chromosome, complete genome | blastn | 78799 | 1447 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 15603653 | 15603653 | PRJNA1148965_S_NODE_733_length_250_cov_1.621469_g730_i0 | PRJNA1148965 | 733 | 250 | 1.621469 | 4.0536725 | synthetic construct | 32630 | Root_unresolved | Root_unresolved | 71.3 | 6.25e-8 | NTclustered | gi|2163361818|dbj|LC597737.1| | 32630 | g730 | i0 | 100 | 16.316 | 38 | 0 | 15 | 0 | 6 | 43 | 6 | 43 | Synthetic construct LB155 DNA, synthetic long-barcode fragment | blastn | 4079 | 71.3 | 1 | synthetic construct | |||||||||
| 17614297 | 17614297 | PRJNA1148965_S_NODE_34_length_613_cov_1.590741_g32_i0 | PRJNA1148965 | 34 | 613 | 1.590741 | 9.75124233 | Bacillus | 1386 | Bacteria | Bacteria | 1127 | 0 | NTclustered | gi|2257786247|gb|CP085402.1| | 1392 | g32 | i0 | 99.837 | 99.8613376835237 | 613 | 1 | 100 | 0 | 1 | 613 | 3357108 | 3356496 | Bacillus anthracis strain CMF9 chromosome, complete genome | blastn | 61215 | 1127 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 18152558 | 18152558 | PRJNA1148965_S_NODE_435_length_298_cov_1.128889_g432_i0 | PRJNA1148965 | 435 | 298 | 1.128889 | 3.36408922 | Bos taurus | 9913 | Chordata | Chordata | 507 | 4.92e-139 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g432 | i0 | 100 | 15.7785234899329 | 274 | 0 | 92 | 0 | 1 | 274 | 4360 | 4087 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 4702 | 507 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 18152559 | 18152559 | PRJNA1148965_S_NODE_635_length_262_cov_1.005291_g632_i0 | PRJNA1148965 | 635 | 262 | 1.005291 | 2.63386242 | Mus musculus | 10090 | Chordata | Chordata | 484 | 1.99e-132 | NTclustered | gi|145966796|ref|NM_008221.4| | 10090 | g632 | i0 | 100 | 64.1984732824427 | 262 | 0 | 100 | 0 | 1 | 262 | 604 | 343 | Mus musculus hemoglobin Y, beta-like embryonic chain (Hbb-y), mRNA | blastn | 16820 | 484 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18888125 | 18888125 | PRJNA1148965_S_NODE_915_length_228_cov_2.400000_g912_i0 | PRJNA1148965 | 915 | 228 | 2.4 | 5.472 | root | 1 | Root_unresolved | Root_unresolved | 73.1 | 1.56e-8 | NTclustered | gi|1572541187|emb|LR135910.1| | 1462426 | g912 | i0 | 97.674 | 19.8114035087719 | 43 | 0 | 18 | 1 | 18 | 59 | 24570 | 24528 | uncultured Aenigmarchaeota archaeon genomic DNA containing deoA-rbcL-e2b2 region region | blastn | 4517 | 73.1 | 1 | Archaea | Nanobdellati | Candidatus Aenigmatarchaeota | uncultured Aenigmarchaeota archaeon | ||||||
| 19426963 | 19426963 | PRJNA1148965_S_NODE_36_length_607_cov_1.516854_g34_i0 | PRJNA1148965 | 36 | 607 | 1.516854 | 9.20730378 | synthetic construct | 32630 | Root_unresolved | Root_unresolved | 71.3 | 1.66e-7 | NTclustered | gi|2163361756|dbj|LC597675.1| | 32630 | g34 | i0 | 100 | 6.74794069192751 | 38 | 0 | 6 | 0 | 6 | 43 | 7 | 44 | Synthetic construct LB023 DNA, synthetic long-barcode fragment | blastn | 4096 | 71.3 | 1 | synthetic construct | |||||||||
| 19426964 | 19426964 | PRJNA1148965_S_NODE_416_length_303_cov_7471.495652_g413_i0 | PRJNA1148965 | 416 | 303 | 7471.495652 | 22638.63182556 | Enterococcus phage SSMH01 | 3075855 | Viruses | Viruses | 137 | 7.57e-28 | NTclustered | gi|2583824285|gb|OR360270.1| | 3075855 | g413 | i0 | 93.548 | 21.9075907590759 | 93 | 4 | 31 | 1 | 211 | 303 | 41599 | 41689 | Enterococcus phage SSMH01, complete genome | blastn | 6638 | 137 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Efquatrovirus | Enterococcus phage SSMH01 | ||||
| 20162904 | 20162904 | PRJNA1148965_S_NODE_376_length_317_cov_1.684426_g373_i0 | PRJNA1148965 | 376 | 317 | 1.684426 | 5.33963042 | root | 1 | Root_unresolved | Root_unresolved | 69.4 | 2.95e-7 | NTclustered | gi|2163361752|dbj|LC597671.1| | 32630 | g373 | i0 | 97.5 | 13.4700315457413 | 40 | 1 | 13 | 0 | 9 | 48 | 6 | 45 | Synthetic construct LB008 DNA, synthetic long-barcode fragment | blastn | 4270 | 69.4 | 1 | synthetic construct | |||||||||
| 20702249 | 20702249 | PRJNA1148965_S_NODE_257_length_353_cov_1.296429_g254_i0 | PRJNA1148965 | 257 | 353 | 1.296429 | 4.57639437 | Mus musculus | 10090 | Chordata | Chordata | 625 | 1.5699999999999996e-174 | NTclustered | gi|12846704|dbj|AK010927.1| | 10090 | g254 | i0 | 98.584 | 99.614730878187 | 353 | 5 | 100 | 0 | 1 | 353 | 200 | 552 | Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510008C04 product:hemoglobin, beta adult major chain, full insert sequence | blastn | 35164 | 625 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21438429 | 21438429 | PRJNA1148965_S_NODE_317_length_333_cov_1.284615_g314_i0 | PRJNA1148965 | 317 | 333 | 1.284615 | 4.27776795 | Mus | 10088 | Chordata | Chordata | 610 | 4.13e-170 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g314 | i0 | 99.7 | 100 | 333 | 1 | 100 | 0 | 1 | 333 | 976 | 1308 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 33300 | 610 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21977652 | 21977652 | PRJNA1148965_S_NODE_358_length_322_cov_3.341365_g355_i0 | PRJNA1148965 | 358 | 322 | 3.341365 | 10.7591953 | Betaentomopoxvirus amoorei | 28321 | Viruses | Viruses | 52.8 | 0.03 | NTclustered | gi|9964314|ref|NC_002520.1| | 28321 | g355 | i0 | 94.286 | 0.108695652173913 | 35 | 1 | 11 | 1 | 103 | 136 | 153475 | 153509 | Amsacta moorei entomopoxvirus 'L', complete genome | blastn | 35 | 52.8 | 1 | Viruses | Bamfordvirae | Nucleocytoviricota | Pokkesviricetes | Chitovirales | Poxviridae | Betaentomopoxvirus | Betaentomopoxvirus amoorei | ||
| 22713471 | 22713471 | PRJNA1148965_S_NODE_278_length_346_cov_0.893773_g275_i0 | PRJNA1148965 | 278 | 346 | 0.893773 | 3.09245458 | Bovidae | 9895 | Chordata | Chordata | 573 | 5.65e-159 | NTclustered | gi|2633868663|ref|XR_009736655.1| | 9906 | g275 | i0 | 96.532 | 1603.85549132948 | 346 | 12 | 100 | 0 | 1 | 346 | 12325 | 12670 | PREDICTED: Bos javanicus uncharacterized LOC133248291 (LOC133248291), ncRNA | blastn | 554934 | 577 | 0.993067590987868 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 22713472 | 22713472 | PRJNA1148965_S_NODE_58_length_544_cov_3663.006369_g56_i0 | PRJNA1148965 | 58 | 544 | 3663.006369 | 19926.75464736 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 804 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g56 | i0 | 100 | 79.9632352941177 | 435 | 0 | 80 | 0 | 110 | 544 | 2629907 | 2629473 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 43500 | 804 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22713473 | 22713473 | PRJNA1148965_S_NODE_718_length_251_cov_3.780899_g715_i0 | PRJNA1148965 | 718 | 251 | 3.780899 | 9.49005649 | root | 1 | Root_unresolved | Root_unresolved | 69.4 | 2.26e-7 | NTclustered | gi|394782671|gb|JX069761.1| | 1206907 | g715 | i0 | 93.617 | 16.996015936255 | 47 | 1 | 19 | 2 | 203 | 249 | 9889 | 9845 | Cloning vector pFosill-1, complete sequence | blastn | 4266 | 69.4 | 1 | Cloning vector pFosill-1 | |||||||||
| 23253125 | 23253125 | PRJNA1148965_S_NODE_119_length_438_cov_6.786301_g116_i0 | PRJNA1148965 | 119 | 438 | 6.786301 | 29.72399838 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 56.5 | 0.003 | NTclustered | gi|2914749311|gb|OR221223.1| | 2832643 | g116 | i0 | 100 | 0.19634703196347 | 30 | 0 | 7 | 0 | 1 | 30 | 40347 | 40318 | MAG: Caudoviricetes sp. isolate MSP1894 genomic sequence | blastn | 86 | 56.5 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 23253126 | 23253126 | PRJNA1148965_S_NODE_419_length_302_cov_3.096070_g416_i0 | PRJNA1148965 | 419 | 302 | 3.09607 | 9.3501314 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 82.4 | 3.59e-11 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g416 | i0 | 89.394 | 19.2615894039735 | 66 | 5 | 22 | 1 | 2 | 67 | 30055 | 29992 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 5817 | 82.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 23253127 | 23253127 | PRJNA1148965_S_NODE_939_length_208_cov_4.333333_g936_i0 | PRJNA1148965 | 939 | 208 | 4.333333 | 9.01333264 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 71.3 | 5.03e-8 | NTclustered | gi|2560263575|emb|OY712376.1| | 2697049 | g936 | i0 | 93.75 | 19.7115384615385 | 48 | 1 | 23 | 1 | 1 | 48 | 5963 | 5918 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4100 | 71.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 23988768 | 23988768 | PRJNA1148965_S_NODE_479_length_288_cov_1.032558_g476_i0 | PRJNA1148965 | 479 | 288 | 1.032558 | 2.97376704 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 532 | 7.8e-147 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g476 | i0 | 100 | 100 | 288 | 0 | 100 | 0 | 1 | 288 | 2630709 | 2630996 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 28800 | 532 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 23988769 | 23988769 | PRJNA1148965_S_NODE_839_length_243_cov_0.917647_g836_i0 | PRJNA1148965 | 839 | 243 | 0.917647 | 2.22988221 | Viruses | 10239 | Viruses | Viruses | 73.1 | 1.68e-8 | NTclustered | gi|2557633336|emb|OY694998.1| | 2697049 | g836 | i0 | 92.308 | 19.3662551440329 | 52 | 2 | 21 | 2 | 192 | 243 | 19653 | 19702 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4706 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 24526784 | 24526784 | PRJNA1148965_S_NODE_200_length_373_cov_1.940000_g197_i0 | PRJNA1148965 | 200 | 373 | 1.94 | 7.2362 | synthetic construct | 32630 | Root_unresolved | Root_unresolved | 73.1 | 2.72e-8 | NTclustered | gi|2163361818|dbj|LC597737.1| | 32630 | g197 | i0 | 100 | 11.0026809651475 | 39 | 0 | 10 | 0 | 6 | 44 | 6 | 44 | Synthetic construct LB155 DNA, synthetic long-barcode fragment | blastn | 4104 | 73.1 | 1 | synthetic construct | |||||||||
| 24526785 | 24526785 | PRJNA1148965_S_NODE_440_length_297_cov_1.000000_g437_i0 | PRJNA1148965 | 440 | 297 | 1 | 2.97 | Bos taurus | 9913 | Chordata | Chordata | 217 | 9.25e-52 | NTclustered | gi|320090038|gb|HQ144226.1| | 9913 | g437 | i0 | 97.638 | 447.710437710438 | 127 | 2 | 43 | 1 | 74 | 200 | 545 | 670 | Bos taurus clone NN14 EDA gene, intron 1 | blastn | 132970 | 217 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 25262822 | 25262822 | PRJNA1148965_S_NODE_20_length_759_cov_1.867347_g18_i0 | PRJNA1148965 | 20 | 759 | 1.867347 | 14.17316373 | Escherichia | 561 | Bacteria | Bacteria | 1402 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g18 | i0 | 100 | 100 | 759 | 0 | 100 | 0 | 1 | 759 | 2114563 | 2113805 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 75900 | 1402 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28019601 | 28019601 | PRJNA1148965_S_NODE_865_length_242_cov_0.875740_g862_i0 | PRJNA1148965 | 865 | 242 | 0.87574 | 2.1192908 | Shigella sonnei | 624 | Bacteria | Bacteria | 123 | 5.929999999999998e-35 | NR | WP_353799288.1 | 624 | g862 | i0 | 96.7 | 1.51239669421488 | 61 | 2 | 75.6 | 0 | 241 | 59 | 1 | 61 | WP_353799288.1 hypothetical protein, partial [Shigella sonnei] | diamond | 366 | 123 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;