RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA1148190", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 11 ✖

tax_phylum 1

  • Duplornaviricota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1148190 · 11 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3585573 3585573 PRJNA1148190_P_NODE_413643_length_283_cov_3.090476_g402470_i0 PRJNA1148190 413643 283 3.090476 8.74604708 Totivirus 11007 Viruses Viruses 501 2.1599999999999998e-137   NTclustered gi|9627980|ref|NC_001641.1| 42478 g402470 i0 98.587 4.34628975265018 283 4 100 0 1 283 4309 4591 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 1230 501 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
7952689 7952689 PRJNA1148190_P_NODE_73827_length_644_cov_1.583187_g62724_i0 PRJNA1148190 73827 644 1.583187 10.19572428 Totivirus ni 3432954 Viruses Viruses 1182 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g62724 i0 99.844 6.38509316770186 643 1 99 0 2 644 1892 2534 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 4112 1182 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
9225843 9225843 PRJNA1148190_P_NODE_597208_length_250_cov_2.282486_g586035_i0 PRJNA1148190 597208 250 2.282486 5.706215 Totivirus ichi 3432942 Viruses Viruses 451 1.91e-122   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g586035 i0 99.2 21.1 250 2 100 0 1 250 1853 2102 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 5275 451 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
13045001 13045001 PRJNA1148190_P_NODE_156111_length_421_cov_1.327586_g144944_i0 PRJNA1148190 156111 421 1.327586 5.58913706 Totivirus ichi 3432942 Viruses Viruses 778 0   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g144944 i0 100 3.37054631828979 421 0 100 0 1 421 2753 3173 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 1419 778 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
13045880 13045880 PRJNA1148190_P_NODE_208971_length_369_cov_3.361486_g197801_i0 PRJNA1148190 208971 369 3.361486 12.40388334 Totivirus ni 3432954 Viruses Viruses 682 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g197801 i0 100 3 369 0 100 0 1 369 387 19 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 1107 682 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
14323220 14323220 PRJNA1148190_P_NODE_342032_length_303_cov_1.800000_g330859_i0 PRJNA1148190 342032 303 1.8 5.454 Totivirus ichi 3432942 Viruses Viruses 549 8.209999999999997e-152   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g330859 i0 99.34 5.78547854785479 303 2 100 0 1 303 2325 2627 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 1753 549 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
16870551 16870551 PRJNA1148190_P_NODE_28734_length_1338_cov_2.422134_g19268_i0 PRJNA1148190 28734 1338 2.422134 32.40815292 Totivirus ni 3432954 Viruses Viruses 2444 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g19268 i0 99.626 3 1338 5 100 0 1 1338 1918 581 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 4014 2444 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
18143269 18143269 PRJNA1148190_P_NODE_167355_length_407_cov_1.943114_g156186_i0 PRJNA1148190 167355 407 1.943114 7.90847398 Totivirus ichi 3432942 Viruses Viruses 741 0   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g156186 i0 99.509 5.6044226044226 407 2 100 0 1 407 3296 3702 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 2281 741 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
21969744 21969744 PRJNA1148190_P_NODE_251558_length_342_cov_2.650558_g240388_i0 PRJNA1148190 251558 342 2.650558 9.06490836 Totivirus ichi 3432942 Viruses Viruses 621 1.9599999999999997e-173   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g240388 i0 99.415 3 342 2 100 0 1 342 1318 1659 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 1026 621 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
21977308 21977308 PRJNA1148190_P_NODE_83778_length_594_cov_1.696737_g72647_i0 PRJNA1148190 83778 594 1.696737 10.07861778 Totivirus ni 3432954 Viruses Viruses 1070 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g72647 i0 99.158 2 594 5 100 0 1 594 2797 3390 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 1188 1070 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
24519878 24519878 PRJNA1148190_P_NODE_317880_length_312_cov_1.933054_g306707_i0 PRJNA1148190 317880 312 1.933054 6.03112848 Totivirus ni 3432954 Viruses Viruses 555 1.8199999999999994e-153   NTclustered gi|9627980|ref|NC_001641.1| 42478 g306707 i0 98.718 2 312 4 100 0 1 312 3533 3844 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 624 555 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;