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contig_metadata

10 rows where bioproject = "PRJNA1148190", tax_kingdom = "Metazoa" and tax_phylum = "Nematomorpha"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 10 ✖

tax_kingdom 1

  • Metazoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1148190 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10502083 10502083 PRJNA1148190_P_NODE_631289_length_249_cov_0.875000_g620116_i0 PRJNA1148190 631289 249 0.875 2.17875 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 54.7 0.006   NTclustered gi|2733955186|ref|XR_010571812.1| 3053472 g620116 i0 100 0.116465863453815 29 0 12 0 76 104 596 568 PREDICTED: Gordionus sp. m RMFG-2023 uncharacterized LOC135926254 (LOC135926254), transcript variant X1, ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
14324492 14324492 PRJNA1148190_P_NODE_430752_length_280_cov_1.449275_g419579_i0 PRJNA1148190 430752 280 1.449275 4.05797 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 95.3 4.23e-15   NTclustered gi|2733962267|ref|XM_065465536.1| 3053472 g419579 i0 88.462 0.707142857142857 78 9 28 0 191 268 472 395 PREDICTED: Gordionus sp. m RMFG-2023 transitional endoplasmic reticulum ATPase (LOC135929045), mRNA blastn 198 95.3 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
20693997 20693997 PRJNA1148190_P_NODE_227957_length_356_cov_1.632509_g216787_i0 PRJNA1148190 227957 356 1.632509 5.81173204 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 52.8 0.034   NTclustered gi|2733957004|ref|XM_065462973.1| 3053472 g216787 i0 100 0.0786516853932584 28 0 8 0 263 290 606 579 PREDICTED: Gordionus sp. m RMFG-2023 KH homology domain-containing protein 4-like (LOC135927037), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
20701995 20701995 PRJNA1148190_P_NODE_86557_length_582_cov_2.186640_g75424_i0 PRJNA1148190 86557 582 2.18664 12.7262448 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 185 5.429999999999998e-42   NTclustered gi|2733957639|ref|XM_065463270.1| 3053472 g75424 i0 82.464 2.30756013745704 211 37 36 0 90 300 231 441 PREDICTED: Gordionus sp. m RMFG-2023 histone H2A.V (LOC135927303), mRNA blastn 1343 185 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
26850212 26850212 PRJNA1148190_P_NODE_628981_length_249_cov_0.875000_g617808_i0 PRJNA1148190 628981 249 0.875 2.17875 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 42.4 0.0214   NR CAK9294610.1 3053472 g617808 i0 69.2 0.313253012048193 26 8 31.3 0 59 136 4 29 CAK9294610.1 unnamed protein product [Gordionus sp. m RMFG-2023] diamond 78 42.4 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
26913215 26913215 PRJNA1148190_P_NODE_605982_length_250_cov_0.870056_g594809_i0 PRJNA1148190 605982 250 0.870056 2.17514 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 58.5 1.15e-7   NR XP_065316984.1 3053472 g594809 i0 42.9 2.784 77 42 92.4 2 240 10 1758 1832 XP_065316984.1 myotubularin-related protein 13-like [Gordionus sp. m RMFG-2023] diamond 696 58.5 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
27735034 27735034 PRJNA1148190_P_NODE_509984_length_265_cov_0.968750_g498811_i0 PRJNA1148190 509984 265 0.96875 2.5671875 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 43.5 0.0061   NR XP_065318006.1 3053472 g498811 i0 56.7 0.339622641509434 30 13 34 0 2 91 68 97 XP_065318006.1 activated RNA polymerase II transcriptional coactivator p15-like [Gordionus sp. m RMFG-2023] diamond 90 43.5 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
28018617 28018617 PRJNA1148190_P_NODE_287705_length_325_cov_1.238095_g276534_i0 PRJNA1148190 287705 325 1.238095 4.02380875 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 44.7 0.0186   NR XP_065320230.1 3053472 g276534 i0 37.3 0.729230769230769 51 28 43.4 1 71 211 37 87 XP_065320230.1 cleavage and polyadenylation specificity factor subunit 4-like isoform X1 [Gordionus sp. m RMFG-2023] diamond 237 44.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
28492740 28492740 PRJNA1148190_P_NODE_605667_length_250_cov_0.870056_g594494_i0 PRJNA1148190 605667 250 0.870056 2.17514 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 46.2 0.00248   NR CAK9300083.1 3053472 g594494 i0 41.4 3.876 58 31 67.2 2 168 1 547 603 CAK9300083.1 unnamed protein product [Gordionus sp. m RMFG-2023] diamond 969 46.2 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
30197796 30197796 PRJNA1148190_P_NODE_690772_length_246_cov_0.890173_g679599_i0 PRJNA1148190 690772 246 0.890173 2.18982558 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 42.7 0.0365   NR XP_065321688.1 3053472 g679599 i0 50 0.439024390243902 36 18 43.9 0 139 32 48 83 XP_065321688.1 CCR4-NOT transcription complex subunit 7-like [Gordionus sp. m RMFG-2023] diamond 108 42.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;