contig_metadata
7 rows where bioproject = "PRJNA1146366" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 290298 | 290298 | PRJNA1146366_S_NODE_1641_length_278_cov_1.517073_g1638_i0 | PRJNA1146366 | 1641 | 278 | 1.517073 | 4.21746294 | Ovis aries | 9940 | Chordata | Chordata | 154 | 6.82e-33 | NTclustered | gi|199945614|gb|FJ042940.1| | 9940 | g1638 | i0 | 89.431 | 45.6834532374101 | 123 | 12 | 44 | 1 | 72 | 193 | 34254 | 34132 | Ovis aries APOBEC3A (APOBEC3A) gene, complete cds; APOBEC3F (APOBEC3F) gene, complete cds, alternatively spliced; and CBX7 gene, complete sequence | blastn | 12700 | 154 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Ovis | Ovis aries | |
| 6136527 | 6136527 | PRJNA1146366_S_NODE_365_length_416_cov_10.169096_g362_i0 | PRJNA1146366 | 365 | 416 | 10.169096 | 42.30343936 | Ochotona princeps | 9978 | Chordata | Chordata | 72.8 | 3.68e-14 | NR | XP_058514412.1 | 9978 | g362 | i0 | 74 | 1.75240384615385 | 50 | 13 | 36.1 | 0 | 78 | 227 | 3 | 52 | XP_058514412.1 thymosin beta-15A isoform X1 [Ochotona princeps] | diamond | 729 | 72.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Lagomorpha | Ochotonidae | Ochotona | Ochotona princeps | |
| 18142034 | 18142034 | PRJNA1146366_S_NODE_2315_length_247_cov_2.839080_g2312_i0 | PRJNA1146366 | 2315 | 247 | 2.83908 | 7.0125276 | Hyla sarda | 327740 | Chordata | Chordata | 52.8 | 0.022 | NTclustered | gi|2512226893|ref|XM_056533279.1| | 327740 | g2312 | i0 | 100 | 0.11336032388664 | 28 | 0 | 11 | 0 | 1 | 28 | 464 | 437 | PREDICTED: Hyla sarda CLN3 lysosomal/endosomal transmembrane protein, battenin (CLN3), transcript variant X1, mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Hylidae | Hyla | Hyla sarda | |
| 20691796 | 20691796 | PRJNA1146366_S_NODE_1097_length_315_cov_1.834711_g1094_i0 | PRJNA1146366 | 1097 | 315 | 1.834711 | 5.77933965 | Erpetoichthys calabaricus | 27687 | Chordata | Chordata | 211 | 4.6e-50 | NTclustered | gi|2327581580|ref|XM_051922993.1| | 27687 | g1094 | i0 | 79.341 | 7.48571428571429 | 334 | 43 | 99 | 16 | 2 | 315 | 1284 | 957 | PREDICTED: Erpetoichthys calabaricus E3 SUMO-protein ligase ZBED1-like (LOC127526706), mRNA | blastn | 2358 | 211 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Erpetoichthys | Erpetoichthys calabaricus | |
| 20691808 | 20691808 | PRJNA1146366_S_NODE_2397_length_244_cov_4.514620_g2394_i0 | PRJNA1146366 | 2397 | 244 | 4.51462 | 11.0156728 | Meles meles | 9662 | Chordata | Chordata | 54.7 | 0.006 | NTclustered | gi|1190059416|emb|LT800002.1| | 9662 | g2394 | i0 | 100 | 0.463114754098361 | 29 | 0 | 12 | 0 | 1 | 29 | 30 | 58 | Meles meles mRNA for Enzyme (Glyceraldehyde 3-phosphate dehydrogenase gene) | blastn | 113 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Mustelidae | Meles | Meles meles | |
| 28764754 | 28764754 | PRJNA1146366_S_NODE_1767_length_271_cov_4.505051_g1764_i0 | PRJNA1146366 | 1767 | 271 | 4.505051 | 12.20868821 | root | 1 | Root_unresolved | Root_unresolved | 92.4 | 2.88e-22 | NR | KAK2531691.1 | 8932 | g1764 | i0 | 97.8 | 82.859778597786 | 46 | 1 | 50.9 | 0 | 266 | 129 | 22 | 67 | KAK2531691.1 hypothetical protein Q9966_008500 [Columba livia] | diamond | 22455 | 93.2 | 0.991416309012876 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Columbiformes | Columbidae | Columba | Columba livia | |
| 31714117 | 31714117 | PRJNA1146366_S_NODE_1537_length_284_cov_1.981043_g1534_i0 | PRJNA1146366 | 1537 | 284 | 1.981043 | 5.62616212 | Ciona intestinalis | 7719 | Chordata | Chordata | 60.5 | 1.33e-9 | NR | NP_001177191.1 | 7719 | g1534 | i0 | 68.4 | 0.77112676056338 | 38 | 12 | 40.1 | 0 | 284 | 171 | 49 | 86 | NP_001177191.1 selenoprotein W, 1 [Ciona intestinalis] | diamond | 219 | 60.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Ascidiacea | Phlebobranchia | Cionidae | Ciona | Ciona intestinalis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;