RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

25 rows where bioproject = "PRJNA1146029" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1146029 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
290094 290094 PRJNA1146029_P_NODE_18941_length_246_cov_1.341040_g18660_i0 PRJNA1146029 18941 246 1.34104 3.2989584 Eukaryota 2759 Fungi Fungi 107 2.58e-26   NR KAL0080976.1 4837 g18660 i0 59.3 155.890243902439 81 33 98.8 0 244 2 153 233 KAL0080976.1 P-loop containing nucleoside triphosphate hydrolase protein [Phycomyces blakesleeanus] diamond 38349 108 0.990740740740741 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
1564650 1564650 PRJNA1146029_P_NODE_1202_length_813_cov_1.664865_g966_i0 PRJNA1146029 1202 813 1.664865 13.53535245 root 1 Root_unresolved Root_unresolved 397 3.17e-136   NR Q96UF1.1 29924 g966 i0 73.9 34 272 69 100 2 1 813 47 317 Q96UF1.1 RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase 3; Short=GAPDH 3 [Mucor lusitanicus] diamond 27642 401 0.99002493765586 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus
1564837 1564837 PRJNA1146029_P_NODE_4582_length_404_cov_1.268882_g4304_i0 PRJNA1146029 4582 404 1.268882 5.12628328 Halteromyces radiatus 101107 Fungi Fungi 148 4.8e-31   NTclustered gi|2323714695|ref|XM_051541296.1| 101107 g4304 i0 93.878 6.3490099009901 98 6 24 0 1 98 144 241 Halteromyces radiatus zinc-binding ribosomal protein (BX664DRAFT_275648), mRNA blastn 2565 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
2841025 2841025 PRJNA1146029_P_NODE_5143_length_382_cov_3.055016_g4865_i0 PRJNA1146029 5143 382 3.055016 11.67016112 Mucor mucedo 29922 Fungi Fungi 106 2.76e-18   NTclustered gi|2324048535|ref|XM_051594319.1| 29922 g4865 i0 90.244 1.30890052356021 82 6 21 2 212 292 664 584 Mucor mucedo 40S ribosomal protein S6-B (EV154DRAFT_197337), mRNA blastn 500 106 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
6668045 6668045 PRJNA1146029_P_NODE_2106_length_596_cov_1.992352_g1833_i0 PRJNA1146029 2106 596 1.992352 11.87441792 Halteromyces radiatus 101107 Fungi Fungi 281 6.91e-71   NTclustered gi|2323701943|ref|XM_051541797.1| 101107 g1833 i0 80 51.6661073825503 380 76 64 0 84 463 313 692 Halteromyces radiatus 60S ribosomal protein L23 (BX664DRAFT_288460), mRNA blastn 30793 281 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
6668124 6668124 PRJNA1146029_P_NODE_6486_length_348_cov_1.040000_g6208_i0 PRJNA1146029 6486 348 1.04 3.6192 Calcarisporiella thermophila 911321 Fungi Fungi 261 5.03e-65   NTclustered gi|2837869654|ref|XM_069395960.1| 911321 g6208 i0 81.79 63.7586206896552 324 47 91 12 15 332 462 145 Calcarisporiella thermophila 40S ribosomal protein uS13 (VTP21DRAFT_5439), partial mRNA blastn 22188 261 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
7411511 7411511 PRJNA1146029_P_NODE_17026_length_249_cov_3.062500_g16745_i0 PRJNA1146029 17026 249 3.0625 7.625625 Fungi 4751 Fungi Fungi 460 3.16e-125   NTclustered gi|658131632|emb|HF968958.1| 4874 g16745 i0 100 132.389558232932 249 0 100 0 1 249 2254 2006 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 32965 460 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
10493769 10493769 PRJNA1146029_P_NODE_18909_length_246_cov_1.583815_g18628_i0 PRJNA1146029 18909 246 1.583815 3.8961849 Mucor mucedo 29922 Fungi Fungi 215 2.68e-51   NTclustered gi|2324041151|ref|XM_051600232.1| 29922 g18628 i0 84.722 23.4227642276423 216 31 87 2 1 215 7 221 Mucor mucedo 60S ribosomal protein L15 (EV154DRAFT_497163), partial mRNA blastn 5762 215 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
11768952 11768952 PRJNA1146029_P_NODE_9550_length_295_cov_1.180180_g9269_i0 PRJNA1146029 9550 295 1.18018 3.481531 Mucorales 4827 Fungi Fungi 174 6.13e-51   NR XP_051422807.1 64574 g9269 i0 84 42.2135593220339 94 15 95.6 0 283 2 2 95 XP_051422807.1 peptidyl-prolyl cis-trans isomerase D [Radiomyces spectabilis] diamond 12453 174 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
13043890 13043890 PRJNA1146029_P_NODE_6011_length_359_cov_1.076923_g5733_i0 PRJNA1146029 6011 359 1.076923 3.86615357 Mucorales 4827 Fungi Fungi 110 7.29e-28   NR GAA5815844.1 439312 g5733 i0 58.8 7.91364902506964 97 36 81.1 1 3 293 37 129 GAA5815844.1 hypothetical protein MFLAVUS_009360 [Mucor flavus] diamond 2841 110 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor flavus
13787002 13787002 PRJNA1146029_P_NODE_4251_length_416_cov_1.571429_g3973_i0 PRJNA1146029 4251 416 1.571429 6.53714464 Mucorales 4827 Fungi Fungi 200 1.35e-46   NTclustered gi|2323721047|ref|XM_051582306.1| 101096 g3973 i0 89.809 6.11538461538461 157 14 38 2 185 340 243 88 Gilbertella persicaria ribosomal protein S28e (B0P05DRAFT_584049), partial mRNA blastn 2544 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
20691573 20691573 PRJNA1146029_P_NODE_1657_length_678_cov_1.287603_g1396_i0 PRJNA1146029 1657 678 1.287603 8.72994834 Halteromyces radiatus 101107 Fungi Fungi 224 1.35e-53   NTclustered gi|2323723214|ref|XM_051544668.1| 101107 g1396 i0 79.091 25.6076696165192 330 65 48 4 102 429 189 516 Halteromyces radiatus 40S ribosomal protein S18 (BX664DRAFT_328813), mRNA blastn 17362 224 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
20691692 20691692 PRJNA1146029_P_NODE_3517_length_455_cov_1.753927_g3239_i0 PRJNA1146029 3517 455 1.753927 7.98036785 Gilbertella persicaria 101096 Fungi Fungi 270 1.12e-67   NTclustered gi|2323740287|ref|XM_051583307.1| 101096 g3239 i0 83.39 18.5802197802198 295 45 64 4 163 455 444 152 Gilbertella persicaria 40S ribosomal protein S23 (B0P05DRAFT_603980), partial mRNA blastn 8454 270 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
21967016 21967016 PRJNA1146029_P_NODE_2478_length_544_cov_1.961783_g2203_i0 PRJNA1146029 2478 544 1.961783 10.67209952 Halteromyces radiatus 101107 Fungi Fungi 405 3.56e-108   NTclustered gi|2323725137|ref|XM_051544800.1| 101107 g2203 i0 80.597 10.4558823529412 536 94 97 9 12 541 555 24 Halteromyces radiatus 60S ribosomal protein L10-A (BX664DRAFT_329507), mRNA blastn 5688 405 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
22710554 22710554 PRJNA1146029_P_NODE_4718_length_398_cov_1.233846_g4440_i0 PRJNA1146029 4718 398 1.233846 4.91070708 Mucorales 4827 Fungi Fungi 340 7.259999999999999e-89   NTclustered gi|2432557826|ref|XM_053084999.1| 64632 g4440 i0 82.741 88.987437185929707 394 56 97 10 10 397 695 308 Mycotypha africana ubiquitin-60S ribosomal protein L40 (BDF20DRAFT_968967), mRNA blastn 35417 340 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
23242465 23242465 PRJNA1146029_P_NODE_18119_length_248_cov_0.880000_g17838_i0 PRJNA1146029 18119 248 0.88 2.1824 Eukaryota 2759 Fungi Fungi 82.4 3.2e-17   NR ORZ01536.1 13706 g17838 i0 63.2 5.51612903225806 57 21 69 0 6 176 148 204 ORZ01536.1 hypothetical protein BCR43DRAFT_181949 [Syncephalastrum racemosum] diamond 1368 82.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Syncephalastraceae Syncephalastrum Syncephalastrum racemosum
27639435 27639435 PRJNA1146029_P_NODE_12704_length_273_cov_2.280000_g12423_i0 PRJNA1146029 12704 273 2.28 6.2244 Gigaspora rosea 44941 Fungi Fungi 49.3 2.72e-4   NR RIB18321.1 44941 g12423 i0 54.1 2.03296703296703 37 17 40.7 0 4 114 556 592 RIB18321.1 vault protein inter-alpha-trypsin domain-containing protein [Gigaspora rosea] diamond 555 49.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora rosea
27975433 27975433 PRJNA1146029_P_NODE_21665_length_242_cov_0.911243_g21384_i0 PRJNA1146029 21665 242 0.911243 2.20520806 Eukaryota 2759 Fungi Fungi 131 1.5e-34   NR RCH97612.1 4846 g21384 i0 72.5 18.8305785123967 80 22 99.2 0 241 2 155 234 RCH97612.1 NAD-dependent isocitrate dehydrogenase, partial [Rhizopus stolonifer] diamond 4557 132 0.992424242424242 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
28164969 28164969 PRJNA1146029_P_NODE_8825_length_306_cov_1.321888_g8544_i0 PRJNA1146029 8825 306 1.321888 4.04497728 Archaeosporales 1133283 Fungi Fungi 130 8.57e-33   NR KAG9305652.1 50956 g8544 i0 62.1 4.65686274509804 95 36 93.1 0 1 285 590 684 KAG9305652.1 hypothetical protein G9A89_022574 [Geosiphon pyriformis] diamond 1425 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Geosiphonaceae Geosiphon Geosiphon pyriformis
28838966 28838966 PRJNA1146029_P_NODE_17008_length_250_cov_0.870056_g16727_i0 PRJNA1146029 17008 250 0.870056 2.17514 Paraglomus occultum 144539 Fungi Fungi 52.8 1.28e-6   NR CAG8494296.1 144539 g16727 i0 45.5 0.528 44 24 52.8 0 173 42 60 103 CAG8494296.1 1117_t:CDS:2 [Paraglomus occultum] diamond 132 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus occultum
30196786 30196786 PRJNA1146029_P_NODE_11732_length_280_cov_1.212560_g11451_i0 PRJNA1146029 11732 280 1.21256 3.395168 Dissophora ornata 979620 Fungi Fungi 99.8 6.77e-24   NR KAI8605313.1 979620 g11451 i0 55.4 0.889285714285714 83 37 88.9 0 252 4 24 106 KAI8605313.1 ammecr1 protein [Dissophora ornata] diamond 249 99.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Dissophora Dissophora ornata
30470377 30470377 PRJNA1146029_P_NODE_4873_length_392_cov_2.090909_g4595_i0 PRJNA1146029 4873 392 2.090909 8.19636328 Opisthokonta 33154 Fungi Fungi 193 1.39e-60   NR ORZ18059.1 90262 g4595 i0 74.6 43.7295918367347 130 33 99.5 0 2 391 4 133 ORZ18059.1 60S ribosomal protein L12 [Absidia repens] diamond 17142 194 0.994845360824742 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia repens
31007362 31007362 PRJNA1146029_P_NODE_20974_length_243_cov_0.905882_g20693_i0 PRJNA1146029 20974 243 0.905882 2.20129326 root 1 Root_unresolved Root_unresolved 52.8 1.03e-5   NR RIA81677.1 658196 g20693 i0 53.5 2.93827160493827 43 20 53.1 0 151 23 5 47 RIA81677.1 hypothetical protein C1645_836594 [Glomus cerebriforme] diamond 714 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Glomus Glomus cerebriforme
31682223 31682223 PRJNA1146029_P_NODE_14177_length_263_cov_1.621053_g13896_i0 PRJNA1146029 14177 263 1.621053 4.26336939 Parasitella parasitica 35722 Fungi Fungi 45.4 0.00486   NR CEP09563.1 35722 g13896 i0 37.5 0.547528517110266 48 30 54.8 0 239 96 46 93 CEP09563.1 hypothetical protein [Parasitella parasitica] diamond 144 45.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica
32177684 32177684 PRJNA1146029_P_NODE_17578_length_249_cov_0.875000_g17297_i0 PRJNA1146029 17578 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 83.2 1.49e-16   NR KAG0220522.1 90253 g17297 i0 49.4 3.74698795180723 77 39 92.8 0 232 2 87 163 KAG0220522.1 hypothetical protein BGW41_007884, partial [Actinomortierella wolfii] diamond 933 84 0.990476190476191 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Actinomortierella Actinomortierella wolfii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;