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contig_metadata

16 rows where bioproject = "PRJNA1146029" and tax_phylum = "Elusimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1146029 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4117156 4117156 PRJNA1146029_P_NODE_21224_length_242_cov_1.822485_g20943_i0 PRJNA1146029 21224 242 1.822485 4.4104137 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 152 8.78e-45   NR MBI3565299.1 2030800 g20943 i0 88.8 0.991735537190083 80 9 99.2 0 240 1 44 123 MBI3565299.1 lipoyl(octanoyl) transferase LipB [Elusimicrobiota bacterium] diamond 240 152 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
5393384 5393384 PRJNA1146029_P_NODE_21265_length_242_cov_1.668639_g20984_i0 PRJNA1146029 21265 242 1.668639 4.03810638 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 132 1.35e-35   NR MDE2144275.1 2030800 g20984 i0 91.1 1.97107438016529 79 7 97.9 0 4 240 44 122 MDE2144275.1 glutamate 5-kinase [Elusimicrobiota bacterium] diamond 477 132 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
6668049 6668049 PRJNA1146029_P_NODE_21246_length_242_cov_1.822485_g20965_i0 PRJNA1146029 21246 242 1.822485 4.4104137 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 281 2.55e-71   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g20965 i0 88.412 0.962809917355372 233 27 96 0 9 241 2849528 2849760 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 233 281 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
11768650 11768650 PRJNA1146029_P_NODE_11570_length_281_cov_1.163462_g11289_i0 PRJNA1146029 11570 281 1.163462 3.26932822 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 118 3.08e-31   NR MBI3564238.1 2030800 g11289 i0 86.2 1.38790035587189 65 9 69.4 0 2 196 118 182 MBI3564238.1 sigma-70 family RNA polymerase sigma factor [Elusimicrobiota bacterium] diamond 390 118 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
24515943 24515943 PRJNA1146029_P_NODE_14720_length_259_cov_1.655914_g14439_i0 PRJNA1146029 14720 259 1.655914 4.28881726 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 149 2.76e-44   NR MBI3565845.1 2030800 g14439 i0 85.4 4.78378378378378 82 12 95 0 247 2 1 82 MBI3565845.1 ASCH domain-containing protein [Elusimicrobiota bacterium] diamond 1239 149 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
26721939 26721939 PRJNA1146029_P_NODE_10761_length_286_cov_1.192488_g10480_i0 PRJNA1146029 10761 286 1.192488 3.41051568 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 108 5.160000000000001e-27   NR HRY30108.1 2030800 g10480 i0 55.8 0.996503496503496 95 42 99.7 0 286 2 78 172 HRY30108.1 ABC transporter permease subunit [Elusimicrobiota bacterium] diamond 285 108 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
26880897 26880897 PRJNA1146029_P_NODE_19641_length_245_cov_0.895349_g19360_i0 PRJNA1146029 19641 245 0.895349 2.19360505 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 73.6 5.24e-13   NR HEX4047954.1 2030800 g19360 i0 38.7 0.918367346938776 75 46 91.8 0 230 6 201 275 HEX4047954.1 BNR-4 repeat-containing protein [Elusimicrobiota bacterium] diamond 225 73.6 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
27102098 27102098 PRJNA1146029_P_NODE_19762_length_245_cov_0.895349_g19481_i0 PRJNA1146029 19762 245 0.895349 2.19360505 Candidatus Endomicrobiellum trichonymphae 1408204 Bacteria Bacteria 46.6 1.43e-4   NR WP_158302827.1 1408204 g19481 i0 54.8 0.514285714285714 42 16 51.4 2 184 59 7 45 WP_158302827.1 DUF805 domain-containing protein [Candidatus Endomicrobiellum trichonymphae] diamond 126 46.6 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae Candidatus Endomicrobiellum Candidatus Endomicrobiellum trichonymphae
27260311 27260311 PRJNA1146029_P_NODE_17083_length_249_cov_1.727273_g16802_i0 PRJNA1146029 17083 249 1.727273 4.30090977 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 136 3.0299999999999995e-35   NR MDE2142549.1 2030800 g16802 i0 81.9 1 83 15 100 0 1 249 540 622 MDE2142549.1 cytochrome c/FTR1 family iron permease [Elusimicrobiota bacterium] diamond 249 136 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
27607795 27607795 PRJNA1146029_P_NODE_19304_length_246_cov_0.890173_g19023_i0 PRJNA1146029 19304 246 0.890173 2.18982558 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 45.1 0.00583   NR MFI5348393.1 2030800 g19023 i0 32.9 3.24390243902439 79 53 96.3 0 238 2 5 83 MFI5348393.1 protein kinase [Elusimicrobiota bacterium] diamond 798 45.1 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28555056 28555056 PRJNA1146029_P_NODE_21247_length_242_cov_1.798817_g20966_i0 PRJNA1146029 21247 242 1.798817 4.35313714 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 124 6.37e-33   NR MFI5350929.1 2030800 g20966 i0 76.3 1.98347107438017 80 19 99.2 0 3 242 143 222 MFI5350929.1 sensor histidine kinase [Elusimicrobiota bacterium] diamond 480 124 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28807209 28807209 PRJNA1146029_P_NODE_22108_length_241_cov_0.916667_g21827_i0 PRJNA1146029 22108 241 0.916667 2.20916747 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 125 2.34e-35   NR MBI3564250.1 2030800 g21827 i0 85.7 0.95850622406639 77 11 95.9 0 240 10 2 78 MBI3564250.1 hypothetical protein [Elusimicrobiota bacterium] diamond 231 125 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30670804 30670804 PRJNA1146029_P_NODE_15933_length_251_cov_0.865169_g15652_i0 PRJNA1146029 15933 251 0.865169 2.17157419 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 102 2.27e-26   NR MBI3563656.1 2030800 g15652 i0 88.4 0.824701195219124 69 8 82.5 0 3 209 30 98 MBI3563656.1 NADH-quinone oxidoreductase subunit K [Elusimicrobiota bacterium] diamond 207 102 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30797191 30797191 PRJNA1146029_P_NODE_16494_length_250_cov_1.305085_g16213_i0 PRJNA1146029 16494 250 1.305085 3.2627125 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 114 2.18e-28   NR MBI5595794.1 2030800 g16213 i0 65 0.96 80 28 96 0 6 245 5 84 MBI5595794.1 DUF1016 domain-containing protein [Elusimicrobiota bacterium] diamond 240 114 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31050341 31050341 PRJNA1146029_P_NODE_16595_length_250_cov_0.870056_g16314_i0 PRJNA1146029 16595 250 0.870056 2.17514 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 134 7.22e-36   NR MBI3565409.1 2030800 g16314 i0 78.3 1.992 83 18 99.6 0 2 250 179 261 MBI3565409.1 anhydro-N-acetylmuramic acid kinase [Elusimicrobiota bacterium] diamond 498 134 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31935387 31935387 PRJNA1146029_P_NODE_16457_length_250_cov_1.672316_g16176_i0 PRJNA1146029 16457 250 1.672316 4.18079 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 145 2.02e-39   NR MBI3563670.1 2030800 g16176 i0 89 1.968 82 9 98.4 0 3 248 318 399 MBI3563670.1 protoporphyrinogen oxidase [Elusimicrobiota bacterium] diamond 492 145 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;