RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where bioproject = "PRJNA1146029" and tax_phylum = "Candidatus Saccharimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1146029 · 10 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26721948 26721948 PRJNA1146029_P_NODE_18181_length_248_cov_0.880000_g17900_i0 PRJNA1146029 18181 248 0.88 2.1824 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 74.7 2.14e-13   NR HEV7454881.1 2973664 g17900 i0 46.9 0.979838709677419 81 41 98 1 6 248 412 490 HEV7454881.1 alpha-amylase family glycosyl hydrolase [Candidatus Saccharimonadales bacterium] diamond 243 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27249102 27249102 PRJNA1146029_P_NODE_20243_length_244_cov_0.900585_g19962_i0 PRJNA1146029 20243 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 149 3.2299999999999995e-42   NR WP_129634551.1 95818 g19962 i0 91.4 5.97540983606557 81 7 99.6 0 1 243 191 271 WP_129634551.1 MULTISPECIES: ribonucleotide-diphosphate reductase subunit beta [Candidatus Saccharibacteria] diamond 1458 149 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota          
27386839 27386839 PRJNA1146029_P_NODE_20343_length_244_cov_0.900585_g20062_i0 PRJNA1146029 20343 244 0.900585 2.1974274 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 51.2 3.24e-5   NR HMH69790.1 2973664 g20062 i0 46.9 0.786885245901639 64 34 78.7 0 239 48 210 273 HMH69790.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 192 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27702724 27702724 PRJNA1146029_P_NODE_4264_length_416_cov_0.897959_g3986_i0 PRJNA1146029 4264 416 0.897959 3.73550944 Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_ 1802132 Bacteria Bacteria 49.3 0.00118   NR OGL22344.1 1802132 g3986 i0 28.8 1.00240384615385 139 69 99.5 4 3 416 289 398 OGL22344.1 MAG: hypothetical protein A2707_03390 [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15] diamond 417 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15
29501983 29501983 PRJNA1146029_P_NODE_12050_length_278_cov_1.087805_g11769_i0 PRJNA1146029 12050 278 1.087805 3.0240979 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 40.8 0.0448   NR NCU29983.1 2026720 g11769 i0 35.5 0.820143884892086 76 45 79.9 3 52 273 3 76 NCU29983.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 228 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29659568 29659568 PRJNA1146029_P_NODE_20950_length_243_cov_0.905882_g20669_i0 PRJNA1146029 20950 243 0.905882 2.20129326 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 106 7.91e-25   NR HEX8182900.1 2973664 g20669 i0 73.4 0.790123456790123 64 17 79 0 1 192 382 445 HEX8182900.1 peptidoglycan DD-metalloendopeptidase family protein [Candidatus Saccharimonadales bacterium] diamond 192 106 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30407386 30407386 PRJNA1146029_P_NODE_16253_length_251_cov_0.865169_g15972_i0 PRJNA1146029 16253 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 171 4e-47   NR OYX54067.1 1970481 g15972 i0 96.4 14.8326693227092 83 3 99.2 0 249 1 761 843 OYX54067.1 MAG: DNA polymerase III subunit alpha [Candidatus Saccharibacteria bacterium 32-50-13] diamond 3723 171 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
30418488 30418488 PRJNA1146029_P_NODE_22313_length_241_cov_0.916667_g22032_i0 PRJNA1146029 22313 241 0.916667 2.20916747 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 130 2.51e-35   NR MDO4712911.1 2026720 g22032 i0 78.5 2.95020746887967 79 17 98.3 0 240 4 80 158 MDO4712911.1 DUF2797 domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 711 130 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30512865 30512865 PRJNA1146029_P_NODE_14413_length_261_cov_2.835106_g14132_i0 PRJNA1146029 14413 261 2.835106 7.39962666 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 47.4 0.00111   NR MBQ3293926.1 2026720 g14132 i0 49 0.563218390804598 49 25 56.3 0 8 154 864 912 MBQ3293926.1 cadherin-like beta sandwich domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 147 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30765673 30765673 PRJNA1146029_P_NODE_10554_length_287_cov_1.289720_g10273_i0 PRJNA1146029 10554 287 1.28972 3.7014964 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 100 1.82e-22   NR MDB5167947.1 2026720 g10273 i0 53.4 0.9198606271777 88 40 90.9 1 1 261 374 461 MDB5167947.1 rane protein of unknown function [Candidatus Saccharibacteria bacterium] diamond 264 100 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;