RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1146029" and tax_phylum = "Candidatus Magasanikiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Magasanikiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1146029 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27260316 27260316 PRJNA1146029_P_NODE_20963_length_243_cov_0.905882_g20682_i0 PRJNA1146029 20963 243 0.905882 2.20129326 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 44.7 0.00799   NR HRY36901.1 2026717 g20682 i0 38.7 3.30864197530864 62 32 69.1 2 62 229 2413 2474 HRY36901.1 hypothetical protein [Candidatus Magasanikiibacteriota bacterium] diamond 804 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium
32315550 32315550 PRJNA1146029_P_NODE_13159_length_270_cov_2.040609_g12878_i0 PRJNA1146029 13159 270 2.040609 5.5096443 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 60.1 4.03e-8   NR MBT4121044.1 2026717 g12878 i0 45.3 0.588888888888889 53 29 58.9 0 110 268 503 555 MBT4121044.1 hypothetical protein [Candidatus Magasanikiibacteriota bacterium] diamond 159 60.1 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;