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contig_metadata

27 rows where bioproject = "PRJNA1146029" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 27 ✖

bioproject 1

  • PRJNA1146029 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2840826 2840826 PRJNA1146029_P_NODE_13543_length_268_cov_1.276923_g13262_i0 PRJNA1146029 13543 268 1.276923 3.42215364 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 1.84e-33   NR XP_002682096.1 5762 g13262 i0 68.5 2.02611940298507 89 28 99.6 0 268 2 144 232 XP_002682096.1 uncharacterized protein NAEGRDRAFT_30192 [Naegleria gruberi] diamond 543 125 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4117131 4117131 PRJNA1146029_P_NODE_19644_length_245_cov_0.895349_g19363_i0 PRJNA1146029 19644 245 0.895349 2.19360505 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 440 4.0399999999999986e-119   NTclustered gi|1031970252|gb|CP015686.1| 85057 g19363 i0 99.184 3.93469387755102 245 1 100 1 1 245 452377 452620 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI36, partial sequence blastn 964 440 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
7943078 7943078 PRJNA1146029_P_NODE_12287_length_276_cov_1.517241_g12006_i0 PRJNA1146029 12287 276 1.517241 4.18758516 Euglena gracilis 3039 Euglenozoa other_Eukaryota 135 2.57e-38   NR QLA09577.1 3039 g12006 i0 73 0.967391304347826 89 24 96.7 0 274 8 65 153 QLA09577.1 40S small subunit ribosomal protein uS17 [Euglena gracilis] diamond 267 135 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
10493678 10493678 PRJNA1146029_P_NODE_14429_length_261_cov_2.031915_g14148_i0 PRJNA1146029 14429 261 2.031915 5.30329815 Trypanosoma 5690 Euglenozoa other_Eukaryota 131 2.38e-33   NR XP_028885534.1 67003 g14148 i0 71.3 5 87 25 100 0 1 261 228 314 XP_028885534.1 putative glycyl-tRNA synthetase [Trypanosoma theileri] diamond 1305 131 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
11236908 11236908 PRJNA1146029_P_NODE_20889_length_243_cov_0.905882_g20608_i0 PRJNA1146029 20889 243 0.905882 2.20129326 Leishmania 5658 Euglenozoa other_Eukaryota 156 1.6200000000000002e-33   NTclustered gi|2593248390|emb|OY748414.1| 5660 g20608 i0 87.879 10.5349794238683 132 16 54 0 104 235 1343718 1343587 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 20 blastn 2560 156 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
12512317 12512317 PRJNA1146029_P_NODE_18430_length_247_cov_0.885057_g18149_i0 PRJNA1146029 18430 247 0.885057 2.18609079 Naegleria 5761 Heterolobosea other_Eukaryota 457 4.05e-124   NTclustered gi|2618963742|gb|OR769034.1| 5762 g18149 i0 100 10.2834008097166 247 0 100 0 1 247 5686 5440 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2540 457 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13043883 13043883 PRJNA1146029_P_NODE_5351_length_376_cov_2.620462_g5073_i0 PRJNA1146029 5351 376 2.620462 9.85293712 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.036   NTclustered gi|1031970221|gb|CP015655.1| 85057 g5073 i0 100 0.074468085106383 28 0 7 0 67 94 50537 50510 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI5, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
15593023 15593023 PRJNA1146029_P_NODE_2013_length_611_cov_1.717472_g1742_i0 PRJNA1146029 2013 611 1.717472 10.49375392 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 301 3.829999999999999e-101   NR QLA09565.1 3039 g1742 i0 76.9 67.5859247135843 195 45 95.7 0 609 25 7 201 QLA09565.1 40S small subunit ribosomal protein uS3 [Euglena gracilis] diamond 41295 304 0.990131578947368 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
16867375 16867375 PRJNA1146029_P_NODE_7834_length_321_cov_3.354839_g7555_i0 PRJNA1146029 7834 321 3.354839 10.76903319 Parabodo caudatus 351713 Euglenozoa other_Eukaryota 571 1.8699999999999993e-158   NTclustered gi|45739057|gb|AY490215.1| 351713 g7555 i0 98.754 96.2398753894081 321 4 100 0 1 321 54 374 Bodo caudatus 18S ribosomal RNA gene, partial sequence blastn 30893 571 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
16867407 16867407 PRJNA1146029_P_NODE_9734_length_292_cov_2.059361_g9453_i0 PRJNA1146029 9734 292 2.059361 6.01333412 Naegleria 5761 Heterolobosea other_Eukaryota 161 5.5e-47   NR XP_002676073.1 5762 g9453 i0 83.5 1.99315068493151 97 16 99.7 0 291 1 68 164 XP_002676073.1 abc transporter [Naegleria gruberi] diamond 582 161 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21435508 21435508 PRJNA1146029_P_NODE_11297_length_282_cov_2.200957_g11016_i0 PRJNA1146029 11297 282 2.200957 6.20669874 Naegleria 5761 Heterolobosea other_Eukaryota 215 3.13e-51   NTclustered gi|2031946985|emb|OD958550.1| 5763 g11016 i0 82.239 43.4858156028369 259 36 92 5 1 259 3012 3260 Naegleria fowleri Karachi_NF001 strain blastn 12263 215 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
21967070 21967070 PRJNA1146029_P_NODE_6438_length_349_cov_0.840580_g6160_i0 PRJNA1146029 6438 349 0.84058 2.9336242 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 599 9.389999999999997e-167   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g6160 i0 97.708 22.7363896848138 349 7 100 1 1 349 3202 3549 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7935 599 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25259933 25259933 PRJNA1146029_P_NODE_14340_length_262_cov_1.560847_g14059_i0 PRJNA1146029 14340 262 1.560847 4.08941914 Kinetoplastea 5653 Euglenozoa other_Eukaryota 215 2.88e-51   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g14059 i0 95.556 72.8702290076336 135 5 51 1 1 134 3465 3331 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 19092 217 0.990783410138249 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
26627398 26627398 PRJNA1146029_P_NODE_16341_length_251_cov_0.865169_g16060_i0 PRJNA1146029 16341 251 0.865169 2.17157419 Bodo saltans 75058 Euglenozoa other_Eukaryota 43.9 0.0156   NR CUE70417.1 75058 g16060 i0 35.3 1.01593625498008 85 48 98 3 4 249 320 400 CUE70417.1 Hypothetical protein, putative [Bodo saltans] diamond 255 43.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27671014 27671014 PRJNA1146029_P_NODE_16844_length_250_cov_0.870056_g16563_i0 PRJNA1146029 16844 250 0.870056 2.17514 Euglena gracilis 3039 Euglenozoa other_Eukaryota 90.9 1.59e-20   NR 6ZJ3_SI 3039 g16563 i0 53.8 0.936 78 36 93.6 0 16 249 7 84 6ZJ3_SI Chain SI, Ribosomal protein eS7 [Euglena gracilis] diamond 234 90.9 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28291077 28291077 PRJNA1146029_P_NODE_11846_length_279_cov_1.422330_g11565_i0 PRJNA1146029 11846 279 1.42233 3.9683007 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42.4 0.0354   NR XP_044549456.1 51637 g11565 i0 41.5 0.806451612903226 41 24 44.1 0 275 153 96 136 XP_044549456.1 uncharacterized protein C9374_003278 [Naegleria lovaniensis] diamond 225 42.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28701771 28701771 PRJNA1146029_P_NODE_5487_length_372_cov_2.846154_g5209_i0 PRJNA1146029 5487 372 2.846154 10.58769288 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 2.75e-34   NR KAJ9469984.1 91374 g5209 i0 55.4 1.78225806451613 112 45 86.3 2 368 48 3 114 KAJ9469984.1 hypothetical protein DIPPA_35953 [Diplonema papillatum] diamond 663 125 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
28775850 28775850 PRJNA1146029_P_NODE_20007_length_244_cov_2.497076_g19726_i0 PRJNA1146029 20007 244 2.497076 6.09286544 Bodo saltans 75058 Euglenozoa other_Eukaryota 131 2.93e-35   NR CUG89506.1 75058 g19726 i0 78.2 0.959016393442623 78 17 95.9 0 239 6 112 189 CUG89506.1 ribosomal RNA methyltransferase, putative [Bodo saltans] diamond 234 131 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29249376 29249376 PRJNA1146029_P_NODE_18709_length_247_cov_0.885057_g18428_i0 PRJNA1146029 18709 247 0.885057 2.18609079 Bodo saltans 75058 Euglenozoa other_Eukaryota 68.9 4.92e-12   NR CUG91528.1 75058 g18428 i0 40 0.97165991902834 80 43 97.2 2 245 6 90 164 CUG91528.1 membrane-associated protein, putative [Bodo saltans] diamond 240 68.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29585422 29585422 PRJNA1146029_P_NODE_20890_length_243_cov_0.905882_g20609_i0 PRJNA1146029 20890 243 0.905882 2.20129326 Trypanosoma 5690 Euglenozoa other_Eukaryota 59.7 7.8e-9   NR XP_819830.1 5693 g20609 i0 47.4 2.20987654320988 57 30 70.4 0 178 8 22 78 XP_819830.1 hypothetical protein, conserved [Trypanosoma cruzi] diamond 537 59.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
29933281 29933281 PRJNA1146029_P_NODE_13971_length_265_cov_1.203125_g13690_i0 PRJNA1146029 13971 265 1.203125 3.18828125 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 103 6.89e-24   NR XP_001687290.1 347515 g13690 i0 55.3 2.90943396226415 85 38 96.2 0 5 259 20 104 XP_001687290.1 delta-6 fatty acid desaturase [Leishmania major strain Friedlin] diamond 771 103 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
29975796 29975796 PRJNA1146029_P_NODE_14031_length_264_cov_1.612565_g13750_i0 PRJNA1146029 14031 264 1.612565 4.2571716 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 67.4 1.02e-10   NR XP_044544450.1 51637 g13750 i0 45.7 1.86363636363636 81 41 89.8 2 245 9 1658 1737 XP_044544450.1 uncharacterized protein C9374_009899 [Naegleria lovaniensis] diamond 492 67.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30185773 30185773 PRJNA1146029_P_NODE_13332_length_269_cov_1.571429_g13051_i0 PRJNA1146029 13332 269 1.571429 4.22714401 Leishmania 5658 Euglenozoa other_Eukaryota 52.8 1.42e-5   NR XP_067711450.1 2802991 g13051 i0 41 1.36059479553903 61 33 68 1 9 191 138 195 XP_067711450.1 hypothetical protein JIQ42_07854 [Leishmania sp. Namibia] diamond 366 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Namibia
30533360 30533360 PRJNA1146029_P_NODE_19033_length_246_cov_0.890173_g18752_i0 PRJNA1146029 19033 246 0.890173 2.18982558 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 51.2 3.97e-5   NR XP_067181208.1 1580590 g18752 i0 35.8 3.21951219512195 67 43 81.7 0 38 238 96 162 XP_067181208.1 hypothetical protein LSCM1_08007 [Leishmania martiniquensis] diamond 792 51.6 0.992248062015504 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania martiniquensis
31987608 31987608 PRJNA1146029_P_NODE_12818_length_273_cov_1.200000_g12537_i0 PRJNA1146029 12818 273 1.2 3.276 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 71.2 1.33e-12   NR XP_067694749.1 5663 g12537 i0 44.9 3.79120879120879 69 38 75.8 0 2 208 160 228 XP_067694749.1 hypothetical protein CUR178_07854 [Leishmania enriettii] diamond 1035 71.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania enriettii
32315558 32315558 PRJNA1146029_P_NODE_17299_length_249_cov_0.875000_g17018_i0 PRJNA1146029 17299 249 0.875 2.17875 Bodo saltans 75058 Euglenozoa other_Eukaryota 89 2.14e-18   NR CUG86630.1 75058 g17018 i0 52.4 0.759036144578313 63 30 75.9 0 191 3 61 123 CUG86630.1 cysteine dioxygenase, putative [Bodo saltans] diamond 189 89 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32788575 32788575 PRJNA1146029_P_NODE_13120_length_271_cov_1.166667_g12839_i0 PRJNA1146029 13120 271 1.166667 3.16166757 Leishmania infantum JPCM5 435258 Euglenozoa other_Eukaryota 47.8 8.41e-4   NR XP_001463928.1 435258 g12839 i0 34.1 0.907749077490775 82 52 88.6 2 9 248 167 248 XP_001463928.1 conserved hypothetical protein [Leishmania infantum JPCM5] diamond 246 47.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania infantum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;