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contig_metadata

3 rows where bioproject = "PRJNA1146029", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1146029 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27449985 27449985 PRJNA1146029_P_NODE_14783_length_259_cov_1.311828_g14502_i0 PRJNA1146029 14783 259 1.311828 3.39763452 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 103 4.5599999999999996e-24   NR MCR4276183.1 2762014 g14502 i0 56.6 0.961389961389961 83 36 96.1 0 258 10 147 229 MCR4276183.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 249 103 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28764749 28764749 PRJNA1146029_P_NODE_10927_length_285_cov_1.174528_g10646_i0 PRJNA1146029 10927 285 1.174528 3.3474048 Bacteria 2 Bacteria Bacteria 185 1.5299999999999996e-55   NR KND50906.1 1659201 g10646 i0 90.5 7.98947368421053 95 9 100 0 285 1 11 105 KND50906.1 MAG: tRNA-specific 2-thiouridylase [Parcubacteria bacterium C7867-007] diamond 2277 185 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-007
29091769 29091769 PRJNA1146029_P_NODE_16968_length_250_cov_0.870056_g16687_i0 PRJNA1146029 16968 250 0.870056 2.17514 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 92.8 3.7e-20   NR MCR4276210.1 2762014 g16687 i0 53.2 2.76 77 36 92.4 0 233 3 179 255 MCR4276210.1 glycosyltransferase [Candidatus Parcubacteria bacterium] diamond 690 92.8 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;